I need to allocate memory of order of 10^15 to store integers which can be of long long type.
If i use an array and declare something like
long long a[1000000000000000];
that's never going to work. So how can i allocate such a huge amount of memory.
Really large arrays generally aren't a job for memory, more one for disk. 1015 array elements at 64 bits apiece is (I think) 8 petabytes. You can pick up 8G memory slices for about $15 at the moment so, even if your machine could handle that much memory or address space, you'd be outlaying about $15 million dollars.
In addition, with upcoming DDR4 being clocked up to about 4GT/s (giga-transfers), even if each transfer was a 64-bit value, it would still take about one million seconds just to initialise that array to zero. Do you really want to be waiting around for eleven and a half days before your code even starts doing anything useful?
And, even if you go the disk route, that's quite a bit. At (roughly) $50 per TB, you're still looking at $400,000 and you'll possibly have to provide your own software for managing those 8,000 disks somehow. And I'm not even going to contemplate figuring out how long it would take to initialise the array on disk.
You may want to think about rephrasing your question to indicate the actual problem rather than what you currently have, a proposed solution. It may be that you don't need that much storage at all.
For example, if you're talking about an array where many of the values are left at zero, a sparse array is one way to go.
You can't. You don't have all this memory, and you'll don't have it for a while. Simple.
EDIT: If you really want to work with data that does not fit into your RAM, you can use some library that work with mass storage data, like stxxl, but it will work a lot slower, and you have always disk size limits.
MPI is what you need, that's actually a small size for parallel computing problems the blue gene Q monster at Lawerence Livermore National Labs holds around 1.5 PB of ram. you need to use block decomposition to divide up your problem and viola!
the basic approach is dividing up the array into equal blocks or chunks among many processors
You need to uppgrade to a 64-bit system. Then get 64-bit-capable compiler then put a l at the end of 100000000000000000.
Have you heard of sparse matrix implementation? In one of the sparse matrices, you just use very little part of the matrix despite of the matrix being huge.
Here are some libraries for you.
Here is a basic info about sparse-matrices You dont actually use all of it. Just the needed few points.
I am writing a program in C to solve an optimisation problem, for which I need to create an array of type float with an order of 1013 elements. Is it practically possible to do so on a machine with 20GB memory.
A float in C occupies 4 bytes (assuming IEEE floating point arithmetic, which is pretty close to universal nowadays). That means 1013 elements are naïvely going to require 4×1013 bytes of space. That's quite a bit (40 TB, a.k.a. quite a lot of disk for a desktop system, and rather more than most people can afford when it comes to RAM) so you need to find another approach.
Is the data sparse (i.e., mostly zeroes)? If it is, you can try using a hash table or tree to store only the values which are anything else; if your data is sufficiently sparse, that'll let you fit everything in. Also be aware that processing 1013 elements will take a very long time. Even if you could process a billion items a second (very fast, even now) it would still take 104 seconds (several hours) and I'd be willing to bet that in any non-trivial situation you'll not be able to get anything near that speed. Can you find some way to make not just the data storage sparse but also the processing, so that you can leave that massive bulk of zeroes alone?
Of course, if the data is non-sparse then you're doomed. In that case, you might need to find a smaller, more tractable problem instead.
I suppose if you had a 64 bit machine with a lot of swap space, you could just declare an array of size 10^13 and it may work.
But for a data set of this size it becomes important to consider carefully the nature of the problem. Do you really need random access read and write operations for all 10^13 elements? Is the array at all sparse? Could you express this as a map/reduce problem? If so, sequential access to 10^13 elements is much more practical than random access.
I have the following situation and I'm expecting some expert advise from SO folks.
I'm writing an application and as a part of that I need to expose an API for creation, modification and deletion of object(s). Each object that gets created should be uniquely identified (only with positive identifiers)!
The system will have the following number of objects in a given day.
Minimal - <50,000 objects (60% - 14.4/24 hrs)
Average - >50,ooo but <65,000 objects (30% - 7.2/24 hrs)
Peak - >65,000 but <100,000 objects (10% - 2.4/24 hrs)
Now, the question is, what should be the type of the object identifier? The case #1 and #2 will fit within unsigned short int (2 bytes). But it cannot accommodate the objects for case #3. So case #3 needs a wider type like int (4 bytes).
I don't want to use an int when the system is in case #1 and case #2 (90% of time), because, say there are currently 65k objects in the system and if we use int to hold object-id then we will use double the size of memory compare to using unsigned short int. OTOH, when the system is in peak (10% of time) we definitely need int to store the object-id.
And, there could be time when the system fluctuates between case #2 and #3 based on the users needs.
In C, is there a way to handle this situation in a memory efficient way i.e. by changing the type of the object-id based on the usage at run-time?!
NOTE: when objects get deleted, the deleted object-id will used for the creation of next object. And object-id wrapping will be done only in the corner case (until and unless it is absolutely required).
The C language doesn't support changing the type of something dynamically. You could probably figure out how to do it one way or another, but it could involve compiling most of your code twice (once for the 16-bit ints and once for the 32-bit ints) and then choosing at run time which version of the code to run. This sounds like a massive pain, and it will only save you 200 kB of memory at most (if anything).
Your computer probably has gigabytes of memory already so I can't imagine 200 kB will make a difference. If you're actually working on an ancient machine with 16 MB of memory then ask your boss for a better machine. Programmers are expensive and hardware is cheap.
If memory usage is critical for you, you can use complex id that will consist of unsigned short and unsigned char - you`ll get 24-bit id and it will be enough for 2^24 = 16777216 objects. Of course it will have some impact on performance, but in such way you can get rid of reallocating space for identifiers.
In case if it is premature optimization - just don`t do it.
This appears to be a case of premature optimization, you're trying to optimize your memory foot print before you even know if it will become an issue for the production server you're running on.
As stated above there are many issues to do with padding and alignment that means that any saving you envisage could ultimately be rendered mute by the compiler. At the same time you're making your code harder to understand and debug with the proposed optimisation of changing the type of the object ID at runtime.
In other words, code it using the smallest type that fits the problem then optimize if it proves that the memory usage is too much. Even if you do get some errors because it is using too much memory, memory is cheap, buy more.
If memory efficiency matter, take a look at trick that UTF-8 encoding use.
This may be analogous to the implementation of pid_t type for process-id in Linux. the Linux user is given an option to increase the maximum number of process/threads created by modifying /proc/sys/kernel/pid_max file. Another idea is to try and create opaque types as mentioned here.
C++ has std::vector and Java has ArrayList, and many other languages have their own form of dynamically allocated array. When a dynamic array runs out of space, it gets reallocated into a larger area and the old values are copied into the new array. A question central to the performance of such an array is how fast the array grows in size. If you always only grow large enough to fit the current push, you'll end up reallocating every time. So it makes sense to double the array size, or multiply it by say 1.5x.
Is there an ideal growth factor? 2x? 1.5x? By ideal I mean mathematically justified, best balancing performance and wasted memory. I realize that theoretically, given that your application could have any potential distribution of pushes that this is somewhat application dependent. But I'm curious to know if there's a value that's "usually" best, or is considered best within some rigorous constraint.
I've heard there's a paper on this somewhere, but I've been unable to find it.
I remember reading many years ago why 1.5 is preferred over two, at least as applied to C++ (this probably doesn't apply to managed languages, where the runtime system can relocate objects at will).
The reasoning is this:
Say you start with a 16-byte allocation.
When you need more, you allocate 32 bytes, then free up 16 bytes. This leaves a 16-byte hole in memory.
When you need more, you allocate 64 bytes, freeing up the 32 bytes. This leaves a 48-byte hole (if the 16 and 32 were adjacent).
When you need more, you allocate 128 bytes, freeing up the 64 bytes. This leaves a 112-byte hole (assuming all previous allocations are adjacent).
And so and and so forth.
The idea is that, with a 2x expansion, there is no point in time that the resulting hole is ever going to be large enough to reuse for the next allocation. Using a 1.5x allocation, we have this instead:
Start with 16 bytes.
When you need more, allocate 24 bytes, then free up the 16, leaving a 16-byte hole.
When you need more, allocate 36 bytes, then free up the 24, leaving a 40-byte hole.
When you need more, allocate 54 bytes, then free up the 36, leaving a 76-byte hole.
When you need more, allocate 81 bytes, then free up the 54, leaving a 130-byte hole.
When you need more, use 122 bytes (rounding up) from the 130-byte hole.
In the limit as n → ∞, it would be the golden ratio: ϕ = 1.618...
For finite n, you want something close, like 1.5.
The reason is that you want to be able to reuse older memory blocks, to take advantage of caching and avoid constantly making the OS give you more memory pages. The equation you'd solve to ensure that a subsequent allocation can re-use all prior blocks reduces to xn − 1 − 1 = xn + 1 − xn, whose solution approaches x = ϕ for large n. In practice n is finite and you'll want to be able to reusing the last few blocks every few allocations, and so 1.5 is great for ensuring that.
(See the link for a more detailed explanation.)
It will entirely depend on the use case. Do you care more about the time wasted copying data around (and reallocating arrays) or the extra memory? How long is the array going to last? If it's not going to be around for long, using a bigger buffer may well be a good idea - the penalty is short-lived. If it's going to hang around (e.g. in Java, going into older and older generations) that's obviously more of a penalty.
There's no such thing as an "ideal growth factor." It's not just theoretically application dependent, it's definitely application dependent.
2 is a pretty common growth factor - I'm pretty sure that's what ArrayList and List<T> in .NET uses. ArrayList<T> in Java uses 1.5.
EDIT: As Erich points out, Dictionary<,> in .NET uses "double the size then increase to the next prime number" so that hash values can be distributed reasonably between buckets. (I'm sure I've recently seen documentation suggesting that primes aren't actually that great for distributing hash buckets, but that's an argument for another answer.)
One approach when answering questions like this is to just "cheat" and look at what popular libraries do, under the assumption that a widely used library is, at the very least, not doing something horrible.
So just checking very quickly, Ruby (1.9.1-p129) appears to use 1.5x when appending to an array, and Python (2.6.2) uses 1.125x plus a constant (in Objects/listobject.c):
/* This over-allocates proportional to the list size, making room
* for additional growth. The over-allocation is mild, but is
* enough to give linear-time amortized behavior over a long
* sequence of appends() in the presence of a poorly-performing
* system realloc().
* The growth pattern is: 0, 4, 8, 16, 25, 35, 46, 58, 72, 88, ...
*/
new_allocated = (newsize >> 3) + (newsize < 9 ? 3 : 6);
/* check for integer overflow */
if (new_allocated > PY_SIZE_MAX - newsize) {
PyErr_NoMemory();
return -1;
} else {
new_allocated += newsize;
}
newsize above is the number of elements in the array. Note well that newsize is added to new_allocated, so the expression with the bitshifts and ternary operator is really just calculating the over-allocation.
Let's say you grow the array size by x. So assume you start with size T. The next time you grow the array its size will be T*x. Then it will be T*x^2 and so on.
If your goal is to be able to reuse the memory that has been created before, then you want to make sure the new memory you allocate is less than the sum of previous memory you deallocated. Therefore, we have this inequality:
T*x^n <= T + T*x + T*x^2 + ... + T*x^(n-2)
We can remove T from both sides. So we get this:
x^n <= 1 + x + x^2 + ... + x^(n-2)
Informally, what we say is that at nth allocation, we want our all previously deallocated memory to be greater than or equal to the memory need at the nth allocation so that we can reuse the previously deallocated memory.
For instance, if we want to be able to do this at the 3rd step (i.e., n=3), then we have
x^3 <= 1 + x
This equation is true for all x such that 0 < x <= 1.3 (roughly)
See what x we get for different n's below:
n maximum-x (roughly)
3 1.3
4 1.4
5 1.53
6 1.57
7 1.59
22 1.61
Note that the growing factor has to be less than 2 since x^n > x^(n-2) + ... + x^2 + x + 1 for all x>=2.
Another two cents
Most computers have virtual memory! In the physical memory you can have random pages everywhere which are displayed as a single contiguous space in your program's virtual memory. The resolving of the indirection is done by the hardware. Virtual memory exhaustion was a problem on 32 bit systems, but it is really not a problem anymore. So filling the hole is not a concern anymore (except special environments). Since Windows 7 even Microsoft supports 64 bit without extra effort. # 2011
O(1) is reached with any r > 1 factor. Same mathematical proof works not only for 2 as parameter.
r = 1.5 can be calculated with old*3/2 so there is no need for floating point operations. (I say /2 because compilers will replace it with bit shifting in the generated assembly code if they see fit.)
MSVC went for r = 1.5, so there is at least one major compiler that does not use 2 as ratio.
As mentioned by someone 2 feels better than 8. And also 2 feels better than 1.1.
My feeling is that 1.5 is a good default. Other than that it depends on the specific case.
The top-voted and the accepted answer are both good, but neither answer the part of the question asking for a "mathematically justified" "ideal growth rate", "best balancing performance and wasted memory". (The second-top-voted answer does try to answer this part of the question, but its reasoning is confused.)
The question perfectly identifies the 2 considerations that have to be balanced, performance and wasted memory. If you choose a growth rate too low, performance suffers because you'll run out of extra space too quickly and have to reallocate too frequently. If you choose a growth rate too high, like 2x, you'll waste memory because you'll never be able to reuse old memory blocks.
In particular, if you do the math1 you'll find that the upper limit on the growth rate is the golden ratio ϕ = 1.618… . Growth rate larger than ϕ (like 2x) mean that you'll never be able to reuse old memory blocks. Growth rates only slightly less than ϕ mean you won't be able to reuse old memory blocks until after many many reallocations, during which time you'll be wasting memory. So you want to be as far below ϕ as you can get without sacrificing too much performance.
Therefore I'd suggest these candidates for "mathematically justified" "ideal growth rate", "best balancing performance and wasted memory":
≈1.466x (the solution to x4=1+x+x2) allows memory reuse after just 3 reallocations, one sooner than 1.5x allows, while reallocating only slightly more frequently
≈1.534x (the solution to x5=1+x+x2+x3) allows memory reuse after 4 reallocations, same as 1.5x, while reallocating slightly less frequently for improved performance
≈1.570x (the solution to x6=1+x+x2+x3+x4) only allows memory reuse after 5 reallocations, but will reallocate even less infrequently for even further improved performance (barely)
Clearly there's some diminishing returns there, so I think the global optimum is probably among those. Also, note that 1.5x is a great approximation to whatever the global optimum actually is, and has the advantage being extremely simple.
1 Credits to #user541686 for this excellent source.
It really depends. Some people analyze common usage cases to find the optimal number.
I've seen 1.5x 2.0x phi x, and power of 2 used before.
If you have a distribution over array lengths, and you have a utility function that says how much you like wasting space vs. wasting time, then you can definitely choose an optimal resizing (and initial sizing) strategy.
The reason the simple constant multiple is used, is obviously so that each append has amortized constant time. But that doesn't mean you can't use a different (larger) ratio for small sizes.
In Scala, you can override loadFactor for the standard library hash tables with a function that looks at the current size. Oddly, the resizable arrays just double, which is what most people do in practice.
I don't know of any doubling (or 1.5*ing) arrays that actually catch out of memory errors and grow less in that case. It seems that if you had a huge single array, you'd want to do that.
I'd further add that if you're keeping the resizable arrays around long enough, and you favor space over time, it might make sense to dramatically overallocate (for most cases) initially and then reallocate to exactly the right size when you're done.
I recently was fascinated by the experimental data I've got on the wasted memory aspect of things. The chart below is showing the "overhead factor" calculated as the amount of overhead space divided by the useful space, the x-axis shows a growth factor. I'm yet to find a good explanation/model of what it reveals.
Simulation snippet: https://gist.github.com/gubenkoved/7cd3f0cb36da56c219ff049e4518a4bd.
Neither shape nor the absolute values that simulation reveals are something I've expected.
Higher-resolution chart showing dependency on the max useful data size is here: https://i.stack.imgur.com/Ld2yJ.png.
UPDATE. After pondering this more, I've finally come up with the correct model to explain the simulation data, and hopefully, it matches experimental data nicely. The formula is quite easy to infer simply by looking at the size of the array that we would need to have for a given amount of elements we need to contain.
Referenced earlier GitHub gist was updated to include calculations using scipy.integrate for numerical integration that allows creating the plot below which verifies the experimental data pretty nicely.
UPDATE 2. One should however keep in mind that what we model/emulate there mostly has to do with the Virtual Memory, meaning the over-allocation overheads can be left entirely on the Virtual Memory territory as physical memory footprint is only incurred when we first access a page of Virtual Memory, so it's possible to malloc a big chunk of memory, but until we first access the pages all we do is reserving virtual address space. I've updated the GitHub gist with CPP program that has a very basic dynamic array implementation that allows changing the growth factor and the Python snippet that runs it multiple times to gather the "real" data. Please see the final graph below.
The conclusion there could be that for x64 environments where virtual address space is not a limiting factor there could be really little to no difference in terms of the Physical Memory footprint between different growth factors. Additionally, as far as Virtual Memory is concerned the model above seems to make pretty good predictions!
Simulation snippet was built with g++.exe simulator.cpp -o simulator.exe on Windows 10 (build 19043), g++ version is below.
g++.exe (x86_64-posix-seh-rev0, Built by MinGW-W64 project) 8.1.0
PS. Note that the end result is implementation-specific. Depending on implementation details dynamic array might or might not access the memory outside the "useful" boundaries. Some implementations would use memset to zero-initialize POD elements for whole capacity -- this will cause virtual memory page translated into physical. However, std::vector implementation on a referenced above compiler does not seem to do that and so behaves as per mock dynamic array in the snippet -- meaning overhead is incurred on the Virtual Memory side, and negligible on the Physical Memory.
I agree with Jon Skeet, even my theorycrafter friend insists that this can be proven to be O(1) when setting the factor to 2x.
The ratio between cpu time and memory is different on each machine, and so the factor will vary just as much. If you have a machine with gigabytes of ram, and a slow CPU, copying the elements to a new array is a lot more expensive than on a fast machine, which might in turn have less memory. It's a question that can be answered in theory, for a uniform computer, which in real scenarios doesnt help you at all.
I know it is an old question, but there are several things that everyone seems to be missing.
First, this is multiplication by 2: size << 1. This is multiplication by anything between 1 and 2: int(float(size) * x), where x is the number, the * is floating point math, and the processor has to run additional instructions for casting between float and int. In other words, at the machine level, doubling takes a single, very fast instruction to find the new size. Multiplying by something between 1 and 2 requires at least one instruction to cast size to a float, one instruction to multiply (which is float multiplication, so it probably takes at least twice as many cycles, if not 4 or even 8 times as many), and one instruction to cast back to int, and that assumes that your platform can perform float math on the general purpose registers, instead of requiring the use of special registers. In short, you should expect the math for each allocation to take at least 10 times as long as a simple left shift. If you are copying a lot of data during the reallocation though, this might not make much of a difference.
Second, and probably the big kicker: Everyone seems to assume that the memory that is being freed is both contiguous with itself, as well as contiguous with the newly allocated memory. Unless you are pre-allocating all of the memory yourself and then using it as a pool, this is almost certainly not the case. The OS might occasionally end up doing this, but most of the time, there is going to be enough free space fragmentation that any half decent memory management system will be able to find a small hole where your memory will just fit. Once you get to really bit chunks, you are more likely to end up with contiguous pieces, but by then, your allocations are big enough that you are not doing them frequently enough for it to matter anymore. In short, it is fun to imagine that using some ideal number will allow the most efficient use of free memory space, but in reality, it is not going to happen unless your program is running on bare metal (as in, there is no OS underneath it making all of the decisions).
My answer to the question? Nope, there is no ideal number. It is so application specific that no one really even tries. If your goal is ideal memory usage, you are pretty much out of luck. For performance, less frequent allocations are better, but if we went just with that, we could multiply by 4 or even 8! Of course, when Firefox jumps from using 1GB to 8GB in one shot, people are going to complain, so that does not even make sense. Here are some rules of thumb I would go by though:
If you cannot optimize memory usage, at least don't waste processor cycles. Multiplying by 2 is at least an order of magnitude faster than doing floating point math. It might not make a huge difference, but it will make some difference at least (especially early on, during the more frequent and smaller allocations).
Don't overthink it. If you just spent 4 hours trying to figure out how to do something that has already been done, you just wasted your time. Totally honestly, if there was a better option than *2, it would have been done in the C++ vector class (and many other places) decades ago.
Lastly, if you really want to optimize, don't sweat the small stuff. Now days, no one cares about 4KB of memory being wasted, unless they are working on embedded systems. When you get to 1GB of objects that are between 1MB and 10MB each, doubling is probably way too much (I mean, that is between 100 and 1,000 objects). If you can estimate expected expansion rate, you can level it out to a linear growth rate at a certain point. If you expect around 10 objects per minute, then growing at 5 to 10 object sizes per step (once every 30 seconds to a minute) is probably fine.
What it all comes down to is, don't over think it, optimize what you can, and customize to your application (and platform) if you must.