I am trying to do the following tutorial:
https://itnext.io/docker-mongodb-authentication-kubernetes-node-js-75ff995151b6
However, in there, they use raw values for the mongo init.js file that is placed within docker-entrypoint-initdb.d folder.
I would like to use environment variables that come from my CI/CD system (Gitlab). Does anyone know how to pass environment variables to the init.js file? I have tried several things like for example use init.sh instead for the shell but without any success.
If I run manually the init shell version, I can have it working because I call mongo with --eval and pass the values, however, the docker-entrypoint-blabla is called automatically, so I do not have control of how this is called and I do not know what I could do for achieving what I want.
Thank you in advance and regards.
you can make use of a shell script to retrieve env variables and create the user.
initdb.d/init-mongo.sh
set -e
mongo <<EOF
use $MONGO_INITDB_DATABASE
db.createUser({
user: '$MONGO_INITDB_USER',
pwd: '$MONGO_INITDB_PWD',
roles: [{
role: 'readWrite',
db: '$MONGO_INITDB_DATABASE'
}]
})
EOF
docker-compose.yml
version: "3.7"
services:
mongodb:
container_name: "mongodb"
image: mongo:4.4
hostname: mongodb
restart: always
volumes:
- ./data/mongodb/mongod.conf:/etc/mongod.conf
- ./data/mongodb/initdb.d/:/docker-entrypoint-initdb.d/
- ./data/mongodb/data/db/:/data/db/
environment:
- MONGO_INITDB_ROOT_USERNAME=root
- MONGO_INITDB_ROOT_PASSWORD=root
- MONGO_INITDB_DATABASE=development
- MONGO_INITDB_USER=mongodb
- MONGO_INITDB_PWD=mongodb
ports:
- 27017:27017
command: [ "-f", "/etc/mongod.conf" ]
Now you can connect to development database using mongodb as user and password credentials.
Use shell script (e.g mongo-init.sh) to access variables. Can still run JavaScript code inside as below.
set -e
mongo <<EOF
use admin
db.createUser({
user: '$MONGO_ADMIN_USER',
pwd: '$MONGO_ADMIN_PASSWORD',
roles: [{
role: 'readWrite',
db: 'dummydb'
}]
})
EOF
Shebang line is not necessary at the beginning as this file will be sourced.
Until recently, I simply used a .sh shell script in the docker-entrypoint-initdb.d directory to access ENV variables, much like #Lazaro answer.
It is now possible to access environment variables from javascript files using process.env, provided the file is run with the newer mongosh instead of mongo, which is now deprecated.
However, according to the Docs (see 'Initializing a fresh instance'), mongosh is only used for .js files in docker-entrypoint-initdb.d if using version 6 or greater. I can confirm this is working using the mongo:6 image tag.
You can use envsubs.
If command not found : here. Install it on your runners host if you use shell runners, else, within the docker image used by the runner, or directly in your script.
(NB: Your link isn't free, so I can't adapt to your situation :p )
Example:
init.js.template:
console.log('$GREET $PEOPLE $PUNCTUATION')
console.log('Pipeline from $CI_COMMIT_BRANCH')
gitlab_ci.yml:
variables:
GREET: "hello"
PEOPLE: "world"
PUNCTUATION: "!"
# ...
script:
- (envsubst < path/to/init.js.template) > path/to/init.js
- cat path/to/init.js
Output:
$ (envsubst < init.js.template) > init.js
$ cat init.js
console.log('hello world !')
console.log('Pipeline from master')
At the end the answer is that you can use a .sh file instead of a .js file within the docker-entrypoint-initdb.d folder. Within the sh script, you can use directly environment variables. However, I could not do that at the beginning because I had a typo and environment variables were not created properly.
I prefer this method because it allows you to keep a normal .js file which you lint instead of embedding the .js file into a string.
Create a dockerfile like so:
FROM mongo:5.0.9
USER mongodb
WORKDIR /docker-entrypoint-initdb.d
COPY env_init_mongo.sh env_init_mongo.sh
WORKDIR /writing
COPY mongo_init.js mongo_init.js
WORKDIR /db/data
At the top of your mongo_init.js file, you can just define variables you need
db_name = DB_NAME
schema_version = SCHEMA_VERSION
and then in your env_init_mongo.sh file, you can just replace the strings you need with environment variables or add lines to the top of the file:
mongo_init="/writing/mongo_init.js"
sed "s/SCHEMA_VERSION/$SCHEMA_VERSION/g" -i $mongo_init
sed "s/DB_NAME/${MONGO_INITDB_DATABASE}/g" -i $mongo_init
sed "1s/^/use ${MONGO_INITDB_DATABASE}\n/" -i $mongo_init # add to top of file
mongo < $mongo_init
I'm trying to write a small script to change the current directory to my project directory:
#!/bin/bash
cd /home/tree/projects/java
I saved this file as proj, added execute permission with chmod, and copied it to /usr/bin. When I call it by:
proj, it does nothing. What am I doing wrong?
Shell scripts are run inside a subshell, and each subshell has its own concept of what the current directory is. The cd succeeds, but as soon as the subshell exits, you're back in the interactive shell and nothing ever changed there.
One way to get around this is to use an alias instead:
alias proj="cd /home/tree/projects/java"
You're doing nothing wrong! You've changed the directory, but only within the subshell that runs the script.
You can run the script in your current process with the "dot" command:
. proj
But I'd prefer Greg's suggestion to use an alias in this simple case.
The cd in your script technically worked as it changed the directory of the shell that ran the script, but that was a separate process forked from your interactive shell.
A Posix-compatible way to solve this problem is to define a shell procedure rather than a shell-invoked command script.
jhome () {
cd /home/tree/projects/java
}
You can just type this in or put it in one of the various shell startup files.
The cd is done within the script's shell. When the script ends, that shell exits, and then you are left in the directory you were. "Source" the script, don't run it. Instead of:
./myscript.sh
do
. ./myscript.sh
(Notice the dot and space before the script name.)
To make a bash script that will cd to a select directory :
Create the script file
#!/bin/sh
# file : /scripts/cdjava
#
cd /home/askgelal/projects/java
Then create an alias in your startup file.
#!/bin/sh
# file /scripts/mastercode.sh
#
alias cdjava='. /scripts/cdjava'
I created a startup file where I dump all my aliases and custom functions.
Then I source this file into my .bashrc to have it set on each boot.
For example, create a master aliases/functions file: /scripts/mastercode.sh
(Put the alias in this file.)
Then at the end of your .bashrc file:
source /scripts/mastercode.sh
Now its easy to cd to your java directory, just type cdjava and you are there.
You can use . to execute a script in the current shell environment:
. script_name
or alternatively, its more readable but shell specific alias source:
source script_name
This avoids the subshell, and allows any variables or builtins (including cd) to affect the current shell instead.
Jeremy Ruten's idea of using a symlink triggered a thought that hasn't crossed any other answer. Use:
CDPATH=:$HOME/projects
The leading colon is important; it means that if there is a directory 'dir' in the current directory, then 'cd dir' will change to that, rather than hopping off somewhere else. With the value set as shown, you can do:
cd java
and, if there is no sub-directory called java in the current directory, then it will take you directly to $HOME/projects/java - no aliases, no scripts, no dubious execs or dot commands.
My $HOME is /Users/jleffler; my $CDPATH is:
:/Users/jleffler:/Users/jleffler/mail:/Users/jleffler/src:/Users/jleffler/src/perl:/Users/jleffler/src/sqltools:/Users/jleffler/lib:/Users/jleffler/doc:/Users/jleffler/work
Use exec bash at the end
A bash script operates on its current environment or on that of its
children, but never on its parent environment.
However, this question often gets asked because one wants to be left at a (new) bash prompt in a certain directory after execution of a bash script from within another directory.
If this is the case, simply execute a child bash instance at the end of the script:
#!/usr/bin/env bash
cd /home/tree/projects/java
echo -e '\nHit [Ctrl]+[D] to exit this child shell.'
exec bash
To return to the previous, parental bash instance, use Ctrl+D.
Update
At least with newer versions of bash, the exec on the last line is no longer required. Furthermore, the script could be made to work with whatever preferred shell by using the $SHELL environment variable. This then gives:
#!/usr/bin/env bash
cd desired/directory
echo -e '\nHit [Ctrl]+[D] to exit this child shell.'
$SHELL
I got my code to work by using. <your file name>
./<your file name> dose not work because it doesn't change your directory in the terminal it just changes the directory specific to that script.
Here is my program
#!/bin/bash
echo "Taking you to eclipse's workspace."
cd /Developer/Java/workspace
Here is my terminal
nova:~ Kael$
nova:~ Kael$ . workspace.sh
Taking you to eclipe's workspace.
nova:workspace Kael$
simply run:
cd /home/xxx/yyy && command_you_want
When you fire a shell script, it runs a new instance of that shell (/bin/bash). Thus, your script just fires up a shell, changes the directory and exits. Put another way, cd (and other such commands) within a shell script do not affect nor have access to the shell from which they were launched.
You can do following:
#!/bin/bash
cd /your/project/directory
# start another shell and replacing the current
exec /bin/bash
EDIT: This could be 'dotted' as well, to prevent creation of subsequent shells.
Example:
. ./previous_script (with or without the first line)
On my particular case i needed too many times to change for the same directory.
So on my .bashrc (I use ubuntu) i've added the
1 -
$ nano ~./bashrc
function switchp
{
cd /home/tree/projects/$1
}
2-
$ source ~/.bashrc
3 -
$ switchp java
Directly it will do: cd /home/tree/projects/java
Hope that helps!
It only changes the directory for the script itself, while your current directory stays the same.
You might want to use a symbolic link instead. It allows you to make a "shortcut" to a file or directory, so you'd only have to type something like cd my-project.
You can combine Adam & Greg's alias and dot approaches to make something that can be more dynamic—
alias project=". project"
Now running the project alias will execute the project script in the current shell as opposed to the subshell.
You can combine an alias and a script,
alias proj="cd \`/usr/bin/proj !*\`"
provided that the script echos the destination path. Note that those are backticks surrounding the script name.
For example, your script could be
#!/bin/bash
echo /home/askgelal/projects/java/$1
The advantage with this technique is that the script could take any number of command line parameters and emit different destinations calculated by possibly complex logic.
to navigate directories quicky, there's $CDPATH, cdargs, and ways to generate aliases automatically
http://jackndempsey.blogspot.com/2008/07/cdargs.html
http://muness.blogspot.com/2008/06/lazy-bash-cd-aliaes.html
https://web.archive.org/web/1/http://articles.techrepublic%2ecom%2ecom/5100-10878_11-5827311.html
In your ~/.bash_profile file. add the next function
move_me() {
cd ~/path/to/dest
}
Restart terminal and you can type
move_me
and you will be moved to the destination folder.
You can use the operator && :
cd myDirectory && ls
While sourcing the script you want to run is one solution, you should be aware that this script then can directly modify the environment of your current shell. Also it is not possible to pass arguments anymore.
Another way to do, is to implement your script as a function in bash.
function cdbm() {
cd whereever_you_want_to_go
echo "Arguments to the functions were $1, $2, ..."
}
This technique is used by autojump: http://github.com/joelthelion/autojump/wiki to provide you with learning shell directory bookmarks.
You can create a function like below in your .bash_profile and it will work smoothly.
The following function takes an optional parameter which is a project.
For example, you can just run
cdproj
or
cdproj project_name
Here is the function definition.
cdproj(){
dir=/Users/yourname/projects
if [ "$1" ]; then
cd "${dir}/${1}"
else
cd "${dir}"
fi
}
Dont forget to source your .bash_profile
This should do what you want. Change to the directory of interest (from within the script), and then spawn a new bash shell.
#!/bin/bash
# saved as mov_dir.sh
cd ~/mt/v3/rt_linux-rt-tools/
bash
If you run this, it will take you to the directory of interest and when you exit it it will bring you back to the original place.
root#intel-corei7-64:~# ./mov_dir.sh
root#intel-corei7-64:~/mt/v3/rt_linux-rt-tools# exit
root#intel-corei7-64:~#
This will even take you to back to your original directory when you exit (CTRL+d)
I did the following:
create a file called case
paste the following in the file:
#!/bin/sh
cd /home/"$1"
save it and then:
chmod +x case
I also created an alias in my .bashrc:
alias disk='cd /home/; . case'
now when I type:
case 12345
essentially I am typing:
cd /home/12345
You can type any folder after 'case':
case 12
case 15
case 17
which is like typing:
cd /home/12
cd /home/15
cd /home/17
respectively
In my case the path is much longer - these guys summed it up with the ~ info earlier.
As explained on the other answers, you have changed the directory, but only within the sub-shell that runs the script. this does not impact the parent shell.
One solution is to use bash functions instead of a bash script (sh); by placing your bash script code into a function. That makes the function available as a command and then, this will be executed without a child process and thus any cd command will impact the caller shell.
Bash functions :
One feature of the bash profile is to store custom functions that can be run in the terminal or in bash scripts the same way you run application/commands this also could be used as a shortcut for long commands.
To make your function efficient system widely you will need to copy your function at the end of several files
/home/user/.bashrc
/home/user/.bash_profile
/root/.bashrc
/root/.bash_profile
You can sudo kwrite /home/user/.bashrc /home/user/.bash_profile /root/.bashrc /root/.bash_profile to edit/create those files quickly
Howto :
Copy your bash script code inside a new function at the end of your bash's profile file and restart your terminal, you can then run cdd or whatever the function you wrote.
Script Example
Making shortcut to cd .. with cdd
cdd() {
cd ..
}
ls shortcut
ll() {
ls -l -h
}
ls shortcut
lll() {
ls -l -h -a
}
If you are using fish as your shell, the best solution is to create a function. As an example, given the original question, you could copy the 4 lines below and paste them into your fish command line:
function proj
cd /home/tree/projects/java
end
funcsave proj
This will create the function and save it for use later. If your project changes, just repeat the process using the new path.
If you prefer, you can manually add the function file by doing the following:
nano ~/.config/fish/functions/proj.fish
and enter the text:
function proj
cd /home/tree/projects/java
end
and finally press ctrl+x to exit and y followed by return to save your changes.
(NOTE: the first method of using funcsave creates the proj.fish file for you).
You need no script, only set the correct option and create an environment variable.
shopt -s cdable_vars
in your ~/.bashrc allows to cd to the content of environment variables.
Create such an environment variable:
export myjava="/home/tree/projects/java"
and you can use:
cd myjava
Other alternatives.
Note the discussion How do I set the working directory of the parent process?
It contains some hackish answers, e.g.
https://stackoverflow.com/a/2375174/755804 (changing the parent process directory via gdb, don't do this) and https://stackoverflow.com/a/51985735/755804 (the command tailcd that injects cd dirname to the input stream of the parent process; well, ideally it should be a part of bash rather than a hack)
It is an old question, but I am really surprised I don't see this trick here
Instead of using cd you can use
export PWD=the/path/you/want
No need to create subshells or use aliases.
Note that it is your responsibility to make sure the/path/you/want exists.
I have to work in tcsh, and I know this is not an elegant solution, but for example, if I had to change folders to a path where one word is different, the whole thing can be done in the alias
a alias_name 'set a = `pwd`; set b = `echo $a | replace "Trees" "Tests"` ; cd $b'
If the path is always fixed, the just
a alias_name2 'cd path/you/always/need'
should work
In the line above, the new folder path is set
This combines the answer by Serge with an unrelated answer by David. It changes the directory, and then instead of forcing a bash shell, it launches the user's default shell. It however requires both getent and /etc/passwd to detect the default shell.
#!/usr/bin/env bash
cd desired/directory
USER_SHELL=$(getent passwd <USER> | cut -d : -f 7)
$USER_SHELL
Of course this still has the same deficiency of creating a nested shell.
I have a custom build command that needs to check if a certain file exists. I tried using
IF(EXISTS "/the/file")
...
ELSE()
...
ENDIF()
but that test is only evaluated one; when cmake is first run. I need it to perform the test every time a make is done. What's the method to check at make-time? Thanks.
You can use add_custom_command to invoke CMake itself in script mode by using the -P command line option.
So your command would be something like:
set(FileToCheck "/the/file")
add_custom_command(TARGET MyExe
POST_BUILD
COMMAND ${CMAKE_COMMAND}
-DFileToCheck=${FileToCheck}
-P ${CMAKE_CURRENT_SOURCE_DIR}/check.cmake
COMMENT "Checking if ${FileToCheck} exists...")
and your script file "check.cmake" would be something like:
if(EXISTS ${FileToCheck})
message("${FileToCheck} exists.")
else()
message("${FileToCheck} doesn't exist.")
endif()
A similar idea
You're going to need add_custom_command, but if you're willing to be a little Unix specific you can always use test.
set(FileToCheck "/the/file")
add_custom_command( OUTPUT output.txt
COMMAND test -e output.txt || echo "Do something meaningful"
COMMENT "Checking if ${FileToCheck} exists...")
[#Frazers] answer is great if you need to add custom logic inside the if(EXISTS).
However, if you just need your build to fail if a single file is missing you can use the cmake -E command line mode to compare the file with itself.
This will make sure the build always stops if the provided file doesn't exist, it's cross-platform safe and works in every version of cmake since 3.0.
set(_fileToCheck "foo.txt")
add_custom_command(TARGET YourTarget
PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E compare_files ${_fileToCheck} ${_fileToCheck}
WORKING_DIRECTORY ${CMAKE_SOURCE_DIR}
COMMENT "Checking if ${_fileToCheck} exists, build will fail if it doesn't"
)
I'm quite often concerned that my hgignore file may be excluding important files. For example I just noticed that I was excluding all .exe files which excluded some little executable tools which should be kept with the source. It was a simple change to include them but makes me worried that the rules could have un-intended consequences.
Is there a way to view a list of all the files which are not being tracked due to the .hgignore file? Just so I can periodically review the list to check I'm happy with it.
The command hg status -i does exactly that.
#Jon beat me to the punch with the right answer, but its worth nothing that along with status -i, there is:
hg status -m (only modified files)
hg status -a (only files that were added)
hg status -r (only files that were removed)
hg status -d (only files that were deleted)
hg status -u (all non-tracked files)
hg status -c (files with no changes, ie. "clean")
hg status -A (all files, ie, everything)
If you want to do manual inspection on the file names, then use the -i/--ignored flag to status:
$ hg status -i
I ignored file.exe
If you want the file names alone, then use -n/--no-status to suppress the I status code printed in front of each filename:
$ hg status -n -i
ignored file.exe
If you need to process the files with xargs, then use the -0/--print0 flag in addition:
$ hg status -n -0 | xargs -0 touch
That will take care of handling spaces correctly — with using -0, there is a risk that you'll end up treating ignored file.exe as two files: ignored and file.exe since shells normally split on spaces.
The above commands show you untracked files matching .hgignore. If you want to solve the related problem of finding tracked files matching .hgignore, then you need to use a fileset query. That looks like this:
$ hg locate "set:hgignore()"
You can use filesets with all commands that operate on files, so you can for example do:
$ hg forget "set:hgignore()"
to schedule the files found for removal (with a copy left behind in your working copy).
Yes, it is Possible.
If You're using smth like TortoiseHg, You can select what files You wanna see.
Here's a sample
I know to create a patch for an existing file is easy:
diff -aru oldFile newFile 2>&1 | tee myPatch.patch
But what to do, if i want to create a patch for a totally new file? Assume my file is residing in a folder called TestDir. Earlier TestDir did not have a file called entirelyNewfile.c, but now it is having the same.
How to create a patch for entirelyNewfile.c? The idea is, the patch should get properly applied to the specs and generate the RPM build. With BUILD dir having this new file.
Just to add: if i try to take diff between the two directories, one having the new file and the other missing the same, to create the patch, it generates an error saying that file is only present in one folder
Add -N to the diff arguments.
diff /dev/null <newfile>
Will create a patch for your newfile.
The easiest way to do this that I know is to put all the files under version control (if they aren't already). I prefer Git, but something similar could be done in any other version control system:
git init
git add .
git commit -m "initial state"
<do your edits here>
git add .
git commit -m "new state"
git diff HEAD^1