How to use murmurhash function effectively for strings - c

I have to use a hash function for my code in C and I found murmurhash 3 (32 bit) hash function I presume.
I have a problem understanding what to input as len and seed.
I inputted arbitrary values as parameters into len and seed, which are 2,000 and 2 respectively but I get very long numbers like -1837466777 or 5738837646 (not accurate but similar in structure to the results I got). I also saw something about bit-masking it and so on.
My question regarding the first is an explanation of len and seed in a simplistic manner.
My question regarding the second is I want to know what to do to that value (if it is a valid return value) to get an actual key that I can use for my hash table
Please make your explanation as simple and broken down as possible. I apologize for my inability to comprehend complex mathematical combinations and advanced theorem, I just need a practical answer so that I can use it immediately and then study the complexities around it later.
Thank you so much and I really appreciate any help.
Here is the code below:
uint32_t murmur3_32(const char *key, uint32_t len, uint32_t seed)
{
static const uint32_t c1 = 0xcc9e2d51;
static const uint32_t c2 = 0x1b873593;
static const uint32_t r1 = 15;
static const uint32_t r2 = 13;
static const uint32_t m = 5;
static const uint32_t n = 0xe6546b64;
uint32_t hash = seed;
const int nblocks = len / 4;
const uint32_t *blocks = (const uint32_t *) key;
int i;
for (i = 0; i < nblocks; i++) {
uint32_t k = blocks[i];
k *= c1;
k = (k << r1) | (k >> (32 - r1));
k *= c2;
hash ^= k;
hash = ((hash << r2) | (hash >> (32 - r2))) * m + n;
}
const uint8_t *tail = (const uint8_t *) (key + nblocks * 4);
uint32_t k1 = 0;
switch (len & 3) {
case 3:
k1 ^= tail[2] << 16;
case 2:
k1 ^= tail[1] << 8;
case 1:
k1 ^= tail[0];
k1 *= c1;
k1 = (k1 << r1) | (k1 >> (32 - r1));
k1 *= c2;
hash ^= k1;
}
hash ^= len;
hash ^= (hash >> 16);
hash *= 0x85ebca6b;
hash ^= (hash >> 13);
hash *= 0xc2b2ae35;
hash ^= (hash >> 16);
return hash;
}

Related

Interleave 4 byte ints to 8 byte int

I'm currently working to create a function which accepts two 4 byte unsigned integers, and returns an 8 byte unsigned long. I've tried to base my work off of the methods depicted by this research but all my attempts have been unsuccessful. The specific inputs I am working with are: 0x12345678 and 0xdeadbeef, and the result I'm looking for is 0x12de34ad56be78ef. This is my work so far:
unsigned long interleave(uint32_t x, uint32_t y){
uint64_t result = 0;
int shift = 33;
for(int i = 64; i > 0; i-=16){
shift -= 8;
//printf("%d\n", i);
//printf("%d\n", shift);
result |= (x & i) << shift;
result |= (y & i) << (shift-1);
}
}
However, this function keeps returning 0xfffffffe which is incorrect. I am printing and verifying these values using:
printf("0x%x\n", z);
and the input is initialized like so:
uint32_t x = 0x12345678;
uint32_t y = 0xdeadbeef;
Any help on this topic would be greatly appreciated, C has been a very difficult language for me, and bitwise operations even more so.
This can be done based on interleaving bits, but skipping some steps so it only interleaves bytes. Same idea: first spread out the bytes in a couple of steps, then combine them.
Here is the plan, illustrated with my amazing freehand drawing skills:
In C (not tested):
// step 1, moving the top two bytes
uint64_t a = (((uint64_t)x & 0xFFFF0000) << 16) | (x & 0xFFFF);
// step 2, moving bytes 2 and 6
a = ((a & 0x00FF000000FF0000) << 8) | (a & 0x000000FF000000FF);
// same thing with y
uint64_t b = (((uint64_t)y & 0xFFFF0000) << 16) | (y & 0xFFFF);
b = ((b & 0x00FF000000FF0000) << 8) | (b & 0x000000FF000000FF);
// merge them
uint64_t result = (a << 8) | b;
Using SSSE3 PSHUFB has been suggested, it'll work but there is an instruction that can do a byte-wise interleave in one go, punpcklbw. So all we need to really do is get the values into and out of vector registers, and that single instruction will then just care of it.
Not tested:
uint64_t interleave(uint32_t x, uint32_t y) {
__m128i xvec = _mm_cvtsi32_si128(x);
__m128i yvec = _mm_cvtsi32_si128(y);
__m128i interleaved = _mm_unpacklo_epi8(yvec, xvec);
return _mm_cvtsi128_si64(interleaved);
}
With bit-shifting and bitwise operations (endianness independent):
uint64_t interleave(uint32_t x, uint32_t y){
uint64_t result = 0;
for(uint8_t i = 0; i < 4; i ++){
result |= ((x & (0xFFull << (8*i))) << (8*(i+1)));
result |= ((y & (0xFFull << (8*i))) << (8*i));
}
return result;
}
With pointers (endianness dependent):
uint64_t interleave(uint32_t x, uint32_t y){
uint64_t result = 0;
uint8_t * x_ptr = (uint8_t *)&x;
uint8_t * y_ptr = (uint8_t *)&y;
uint8_t * r_ptr = (uint8_t *)&result;
for(uint8_t i = 0; i < 4; i++){
*(r_ptr++) = y_ptr[i];
*(r_ptr++) = x_ptr[i];
}
return result;
}
Note: this solution assumes little-endian byte order
You could do it like this:
uint64_t interleave(uint32_t x, uint32_t y)
{
uint64_t z;
unsigned char *a = (unsigned char *)&x; // 1
unsigned char *b = (unsigned char *)&y; // 1
unsigned char *c = (unsigned char *)&z;
c[0] = a[0];
c[1] = b[0];
c[2] = a[1];
c[3] = b[1];
c[4] = a[2];
c[5] = b[2];
c[6] = a[3];
c[7] = b[3];
return z;
}
Interchange a and b on the lines marked 1 depending on ordering requirement.
A version with shifts, where the LSB of y is always the LSB of the output as in your example, is:
uint64_t interleave(uint32_t x, uint32_t y)
{
return
(y & 0xFFull)
| (x & 0xFFull) << 8
| (y & 0xFF00ull) << 8
| (x & 0xFF00ull) << 16
| (y & 0xFF0000ull) << 16
| (x & 0xFF0000ull) << 24
| (y & 0xFF000000ull) << 24
| (x & 0xFF000000ull) << 32;
}
The compilers I tried don't seem to do a good job of optimizing either version so if this is a performance critical situation then maybe the inline assembly suggestion from comments is the way to go.
use union punning. Easy for the compiler to optimize.
#include <stdio.h>
#include <stdint.h>
#include <string.h>
typedef union
{
uint64_t u64;
struct
{
union
{
uint32_t a32;
uint8_t a8[4]
};
union
{
uint32_t b32;
uint8_t b8[4]
};
};
uint8_t u8[8];
}data_64;
uint64_t interleave(uint32_t a, uint32_t b)
{
data_64 in , out;
in.a32 = a;
in.b32 = b;
for(size_t index = 0; index < sizeof(a); index ++)
{
out.u8[index * 2 + 1] = in.a8[index];
out.u8[index * 2 ] = in.b8[index];
}
return out.u64;
}
int main(void)
{
printf("%llx\n", interleave(0x12345678U, 0xdeadbeefU)) ;
}

How to multiply 2 uint8 modulo a big number without using integer type in C language [closed]

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If A and B are of type uint8_t and I want the result C=AxB % N where N is 2^16, how do i do this if I can't use integers (so I can't declare N as an integer, only uint8_t) in C language?
N.B: A, B and C are stored in uint8 arrays, so they are "expressed" as uint8 but their values can be bigger.
In general there is no easy way to do this.
Firstly you need to implement the multiply with carry between A and B for each uint8_t block. See the answer here.
Division with 2^16 really mean "disregard" the last 16 bits, "don't use" the last two uint8_t (as you use the array of int.). As you have the modulus operator, this means just the opposite, so you only need to get the last two uint8_ts.
Take the lowest two uint8 of A (say a0 and a1) and B (say b0 and b1):
split each uint8 in high and low part
a0h = a0 >> 4; ## the same as a0h = a0/16;
a0l = a0 % 16; ## the same as a0l = a0 & 0x0f;
a1h = a1 >> 4;
a1l = a1 % 16;
b0h = b0 >> 4;
b0l = b0 % 16;
b1h = b1 >> 4;
b1l = b1 % 16;
Multiply the lower parts first (x is a buffer var)
x = a0l * b0l;
The first part of the result is the last four bits of x, let's call it s0l
s0l = x % 16;
The top for bits of x are carry.
c = x>>4;
multiply the higher parts of first uint8 and add carry.
x = (a0h * b0h) + c;
The first part of the result is the last four bits of x, let's call it s0h. And we need to get carry again.
s0h = x % 16;
c = x>>4;
We can now combine the s0:
s0 = (s0h << 4) + s0l;
Do exactly the same for the s1 (but don't forget to add the carry!):
x = (a1l * b1l) + c;
s1l = x % 16;
c = x>>4;
x = (a1h * b1h) + c;
s1h = x % 16;
c = x>>4;
s1 = (s1h << 4) + s1l;
Your result at this point is c, s1 and s0 (you need carry for next multiplications eg. s2, s3, s4,). As your formula says %(2^16) you already have your result - s1 and s2. If you have to divide with something else, you should do something similar to the code above, but for division. In this case be careful to catch the dividing with zero, it will give you NAN or something!
You can put A, B, C and S in array and loop it through the indexes to make code cleaner.
Here's my effort. I took the liberty of using larger integers and pointers for looping through the arrays. The numbers are represented by arrays of uint8_t in big-endian order. All the intermediate results are kept in uint8_t variables. The code could be made more efficient if intermediate results could be stored in wider integer variables!
#include <stddef.h>
#include <stdint.h>
#include <stdio.h>
static void add_c(uint8_t *r, size_t len_r, uint8_t x)
{
uint8_t o;
while (len_r--) {
o = r[len_r];
r[len_r] += x;
if (o <= r[len_r])
break;
x = 1;
}
}
void multiply(uint8_t *res, size_t len_res,
const uint8_t *a, size_t len_a, const uint8_t *b, size_t len_b)
{
size_t ia, ib, ir;
for (ir = 0; ir < len_res; ir++)
res[ir] = 0;
for (ia = 0; ia < len_a && ia < len_res; ia++) {
uint8_t ah, al, t;
t = a[len_a - ia - 1];
ah = t >> 4;
al = t & 0xf;
for (ib = 0; ib < len_b && ia + ib < len_res; ib++) {
uint8_t bh, bl, x, o, c0, c1;
t = b[len_b - ib - 1];
bh = t >> 4;
bl = t & 0xf;
c0 = al * bl;
c1 = ah * bh;
o = c0;
t = al * bh;
x = (t & 0xf) << 4;
c0 += x;
x = (t >> 4);
c1 += x;
if (o > c0)
c1++;
o = c0;
t = ah * bl;
x = (t & 0xf) << 4;
c0 += x;
x = (t >> 4);
c1 += x;
if (o > c0)
c1++;
add_c(res, len_res - ia - ib, c0);
add_c(res, len_res - ia - ib - 1, c1);
}
}
}
int main(void)
{
uint8_t a[2] = { 0xee, 0xdd };
uint8_t b[2] = { 0xcc, 0xbb };
uint8_t r[4];
multiply(r, sizeof(r), a, sizeof(a), b, sizeof(b));
printf("0x%02X%02X * 0x%02X%02X = 0x%02X%02X%02X%02X\n",
a[0], a[1], b[0], b[1], r[0], r[1], r[2], r[3]);
return 0;
}
Output:
0xEEDD * 0xCCBB = 0xBF06976F

Extract 14-bit values from an array of bytes in C

In an arbitrary-sized array of bytes in C, I want to store 14-bit numbers (0-16,383) tightly packed. In other words, in the sequence:
0000000000000100000000000001
there are two numbers that I wish to be able to arbitrarily store and retrieve into a 16-bit integer. (in this case, both of them are 1, but could be anything in the given range) If I were to have the functions uint16_t 14bitarr_get(unsigned char* arr, unsigned int index) and void 14bitarr_set(unsigned char* arr, unsigned int index, uint16_t value), how would I implement those functions?
This is not for a homework project, merely my own curiosity. I have a specific project that this would be used for, and it is the key/center of the entire project.
I do not want an array of structs that have 14-bit values in them, as that generates waste bits for every struct that is stored. I want to be able to tightly pack as many 14-bit values as I possibly can into an array of bytes. (e.g.: in a comment I made, putting as many 14-bit values into a chunk of 64 bytes is desirable, with no waste bits. the way those 64 bytes work is completely tightly packed for a specific use case, such that even a single bit of waste would take away the ability to store another 14 bit value)
Well, this is bit fiddling at its best. Doing it with an array of bytes makes it more complicated than it would be with larger elements because a single 14 bit quantity can span 3 bytes, where uint16_t or anything bigger would require no more than two. But I'll take you at your word that this is what you want (no pun intended). This code will actually work with the constant set to anything 8 or larger (but not over the size of an int; for that, additional type casts are needed). Of course the value type must be adjusted if larger than 16.
#include <stdio.h>
#include <stdint.h>
#include <stdlib.h>
#define W 14
uint16_t arr_get(unsigned char* arr, size_t index) {
size_t bit_index = W * index;
size_t byte_index = bit_index / 8;
unsigned bit_in_byte_index = bit_index % 8;
uint16_t result = arr[byte_index] >> bit_in_byte_index;
for (unsigned n_bits = 8 - bit_in_byte_index; n_bits < W; n_bits += 8)
result |= arr[++byte_index] << n_bits;
return result & ~(~0u << W);
}
void arr_set(unsigned char* arr, size_t index, uint16_t value) {
size_t bit_index = W * index;
size_t byte_index = bit_index / 8;
unsigned bit_in_byte_index = bit_index % 8;
arr[byte_index] &= ~(0xff << bit_in_byte_index);
arr[byte_index++] |= value << bit_in_byte_index;
unsigned n_bits = 8 - bit_in_byte_index;
value >>= n_bits;
while (n_bits < W - 8) {
arr[byte_index++] = value;
value >>= 8;
n_bits += 8;
}
arr[byte_index] &= 0xff << (W - n_bits);
arr[byte_index] |= value;
}
int main(void) {
int mod = 1 << W;
int n = 50000;
unsigned x[n];
unsigned char b[2 * n];
for (int tries = 0; tries < 10000; tries++) {
for (int i = 0; i < n; i++) {
x[i] = rand() % mod;
arr_set(b, i, x[i]);
}
for (int i = 0; i < n; i++)
if (arr_get(b, i) != x[i])
printf("Err #%d: %d should be %d\n", i, arr_get(b, i), x[i]);
}
return 0;
}
Faster versions Since you said in comments that performance is an issue: open coding the loops gives a roughly 10% speed improvement on my machine on the little test driver included in the original. This includes random number generation and testing, so perhaps the primitives are 20% faster. I'm confident that 16- or 32-bit array elements would give further improvements because byte access is expensive:
uint16_t arr_get(unsigned char* a, size_t i) {
size_t ib = 14 * i;
size_t iy = ib / 8;
switch (ib % 8) {
case 0:
return (a[iy] | (a[iy+1] << 8)) & 0x3fff;
case 2:
return ((a[iy] >> 2) | (a[iy+1] << 6)) & 0x3fff;
case 4:
return ((a[iy] >> 4) | (a[iy+1] << 4) | (a[iy+2] << 12)) & 0x3fff;
}
return ((a[iy] >> 6) | (a[iy+1] << 2) | (a[iy+2] << 10)) & 0x3fff;
}
#define M(IB) (~0u << (IB))
#define SETLO(IY, IB, V) a[IY] = (a[IY] & M(IB)) | ((V) >> (14 - (IB)))
#define SETHI(IY, IB, V) a[IY] = (a[IY] & ~M(IB)) | ((V) << (IB))
void arr_set(unsigned char* a, size_t i, uint16_t val) {
size_t ib = 14 * i;
size_t iy = ib / 8;
switch (ib % 8) {
case 0:
a[iy] = val;
SETLO(iy+1, 6, val);
return;
case 2:
SETHI(iy, 2, val);
a[iy+1] = val >> 6;
return;
case 4:
SETHI(iy, 4, val);
a[iy+1] = val >> 4;
SETLO(iy+2, 2, val);
return;
}
SETHI(iy, 6, val);
a[iy+1] = val >> 2;
SETLO(iy+2, 4, val);
}
Another variation
This is quite a bit faster yet on my machine, about 20% better than above:
uint16_t arr_get2(unsigned char* a, size_t i) {
size_t ib = i * 14;
size_t iy = ib / 8;
unsigned buf = a[iy] | (a[iy+1] << 8) | (a[iy+2] << 16);
return (buf >> (ib % 8)) & 0x3fff;
}
void arr_set2(unsigned char* a, size_t i, unsigned val) {
size_t ib = i * 14;
size_t iy = ib / 8;
unsigned buf = a[iy] | (a[iy+1] << 8) | (a[iy+2] << 16);
unsigned io = ib % 8;
buf = (buf & ~(0x3fff << io)) | (val << io);
a[iy] = buf;
a[iy+1] = buf >> 8;
a[iy+2] = buf >> 16;
}
Note that for this code to be safe you should allocate one extra byte at the end of the packed array. It always reads and writes 3 bytes even when the desired 14 bits are in the first 2.
One more variation Finally, this runs just a bit slower than the one above (again on my machine; YMMV), but you don't need the extra byte. It uses one comparison per operation:
uint16_t arr_get2(unsigned char* a, size_t i) {
size_t ib = i * 14;
size_t iy = ib / 8;
unsigned io = ib % 8;
unsigned buf = ib % 8 <= 2
? a[iy] | (a[iy+1] << 8)
: a[iy] | (a[iy+1] << 8) | (a[iy+2] << 16);
return (buf >> io) & 0x3fff;
}
void arr_set2(unsigned char* a, size_t i, unsigned val) {
size_t ib = i * 14;
size_t iy = ib / 8;
unsigned io = ib % 8;
if (io <= 2) {
unsigned buf = a[iy] | (a[iy+1] << 8);
buf = (buf & ~(0x3fff << io)) | (val << io);
a[iy] = buf;
a[iy+1] = buf >> 8;
} else {
unsigned buf = a[iy] | (a[iy+1] << 8) | (a[iy+2] << 16);
buf = (buf & ~(0x3fff << io)) | (val << io);
a[iy] = buf;
a[iy+1] = buf >> 8;
a[iy+2] = buf >> 16;
}
}
The easiest solution is to use a struct of eight bitfields:
typedef struct __attribute__((__packed__)) EightValues {
uint16_t v0 : 14,
v1 : 14,
v2 : 14,
v3 : 14,
v4 : 14,
v5 : 14,
v6 : 14,
v7 : 14;
} EightValues;
This struct has a size of 14*8 = 112 bits, which is 14 bytes (seven uint16_t). Now, all you need is to use the last three bits of the array index to select the right bitfield:
uint16_t 14bitarr_get(unsigned char* arr, unsigned int index) {
EightValues* accessPointer = (EightValues*)arr;
accessPointer += index >> 3; //select the right structure in the array
switch(index & 7) { //use the last three bits of the index to access the right bitfield
case 0: return accessPointer->v0;
case 1: return accessPointer->v1;
case 2: return accessPointer->v2;
case 3: return accessPointer->v3;
case 4: return accessPointer->v4;
case 5: return accessPointer->v5;
case 6: return accessPointer->v6;
case 7: return accessPointer->v7;
}
}
Your compiler will do the bit-fiddling for you.
The Basis for Storage Issue
The biggest issue you are facing is the fundamental question of "What is my basis for storage going to be?" You know the basics, what you have available to you is char, short, int, etc... The smallest being 8-bits. No matter how you slice your storage scheme, it will ultimately have to rest in memory in a unit of memory based on this 8 bit per byte layout.
The only optimal, no bits wasted, memory allocation would be to declare an array of char in the least common multiple of 14-bits. It is the full 112-bits in this case (7-shorts or 14-chars). This may be the best option. Here, declaring an array of 7-shorts or 14-chars, would allow the exact storage of 8 14-bit values. Of course if you have no need for 8 of them, then it wouldn't be of much use anyway as it would waste more than the 4-bits lost on a single unsigned value.
Let me know if this is something you would like to further explore. If it is, I'm happy to help with the implementation.
Bitfield Struct
The comments regarding bitfield packing or bit packing are exactly what you need to do. This can involve a structure alone or in combination with a union, or by manually right/left shifting values directly as needed.
A short example applicable to your situation (if I understood correctly you want 2 14-bit areas in memory) would be:
#include <stdio.h>
typedef struct bitarr14 {
unsigned n1 : 14,
n2 : 14;
} bitarr14;
char *binstr (unsigned long n, size_t sz);
int main (void) {
bitarr14 mybitfield;
mybitfield.n1 = 1;
mybitfield.n2 = 1;
printf ("\n mybitfield in memory : %s\n\n",
binstr (*(unsigned *)&mybitfield, 28));
return 0;
}
char *binstr (unsigned long n, size_t sz)
{
static char s[64 + 1] = {0};
char *p = s + 64;
register size_t i = 0;
for (i = 0; i < sz; i++) {
p--;
*p = (n >> i & 1) ? '1' : '0';
}
return p;
}
Output
$ ./bin/bitfield14
mybitfield in memory : 0000000000000100000000000001
Note: the dereference of mybitfield for purposes of printing the value in memory breaks strict aliasing and it is intentional just for the purpose of the output example.
The beauty, and purpose for using a struct in the manner provided is it will allow direct access to each 14-bit part of the struct directly, without having to manually shift, etc.
Update - assuming you want big endian bit packing. This is code meant for a fixed size code word. It's based on code I've used for data compression algorithms. The switch case and fixed logic helps with performance.
typedef unsigned short uint16_t;
void bit14arr_set(unsigned char* arr, unsigned int index, uint16_t value)
{
unsigned int bitofs = (index*14)%8;
arr += (index*14)/8;
switch(bitofs){
case 0: /* bit offset == 0 */
*arr++ = (unsigned char)(value >> 6);
*arr &= 0x03;
*arr |= (unsigned char)(value << 2);
break;
case 2: /* bit offset == 2 */
*arr &= 0xc0;
*arr++ |= (unsigned char)(value >> 8);
*arr = (unsigned char)(value << 0);
break;
case 4: /* bit offset == 4 */
*arr &= 0xf0;
*arr++ |= (unsigned char)(value >> 10);
*arr++ = (unsigned char)(value >> 2);
*arr &= 0x3f;
*arr |= (unsigned char)(value << 6);
break;
case 6: /* bit offset == 6 */
*arr &= 0xfc;
*arr++ |= (unsigned char)(value >> 12);
*arr++ = (unsigned char)(value >> 4);
*arr &= 0x0f;
*arr |= (unsigned char)(value << 4);
break;
}
}
uint16_t bit14arr_get(unsigned char* arr, unsigned int index)
{
unsigned int bitofs = (index*14)%8;
unsigned short value;
arr += (index*14)/8;
switch(bitofs){
case 0: /* bit offset == 0 */
value = ((unsigned int)(*arr++) ) << 6;
value |= ((unsigned int)(*arr ) ) >> 2;
break;
case 2: /* bit offset == 2 */
value = ((unsigned int)(*arr++)&0x3f) << 8;
value |= ((unsigned int)(*arr ) ) >> 0;
break;
case 4: /* bit offset == 4 */
value = ((unsigned int)(*arr++)&0x0f) << 10;
value |= ((unsigned int)(*arr++) ) << 2;
value |= ((unsigned int)(*arr ) ) >> 6;
break;
case 6: /* bit offset == 6 */
value = ((unsigned int)(*arr++)&0x03) << 12;
value |= ((unsigned int)(*arr++) ) << 4;
value |= ((unsigned int)(*arr ) ) >> 4;
break;
}
return value;
}
Here's my version (updated to fix bugs):
#define PACKWID 14 // number of bits in packed number
#define PACKMSK ((1 << PACKWID) - 1)
#ifndef ARCHBYTEALIGN
#define ARCHBYTEALIGN 1 // align to 1=bytes, 2=words
#endif
#define ARCHBITALIGN (ARCHBYTEALIGN * 8)
typedef unsigned char byte;
typedef unsigned short u16;
typedef unsigned int u32;
typedef long long s64;
typedef u16 pcknum_t; // container for packed number
typedef u32 acc_t; // working accumulator
#ifndef ARYOFF
#define ARYOFF long
#endif
#define PRT(_val) ((unsigned long) _val)
typedef unsigned ARYOFF aryoff_t; // bit offset
// packary -- access array of packed numbers
// RETURNS: old value
extern inline pcknum_t
packary(byte *ary,aryoff_t idx,int setflg,pcknum_t newval)
// ary -- byte array pointer
// idx -- index into array (packed number relative)
// setflg -- 1=set new value, 0=just get old value
// newval -- new value to set (if setflg set)
{
aryoff_t absbitoff;
aryoff_t bytoff;
aryoff_t absbitlhs;
acc_t acc;
acc_t nval;
int shf;
acc_t curmsk;
pcknum_t oldval;
// get the absolute bit number for the given array index
absbitoff = idx * PACKWID;
// get the byte offset of the lowest byte containing the number
bytoff = absbitoff / ARCHBITALIGN;
// get absolute bit offset of first containing byte
absbitlhs = bytoff * ARCHBITALIGN;
// get amount we need to shift things by:
// (1) our accumulator
// (2) values to set/get
shf = absbitoff - absbitlhs;
#ifdef MODSHOW
do {
static int modshow;
if (modshow > 50)
break;
++modshow;
printf("packary: MODSHOW idx=%ld shf=%d bytoff=%ld absbitlhs=%ld absbitoff=%ld\n",
PRT(idx),shf,PRT(bytoff),PRT(absbitlhs),PRT(absbitoff));
} while (0);
#endif
// adjust array pointer to the portion we want (guaranteed to span)
ary += bytoff * ARCHBYTEALIGN;
// fetch the number + some other bits
acc = *(acc_t *) ary;
// get the old value
oldval = (acc >> shf) & PACKMSK;
// set the new value
if (setflg) {
// get shifted mask for packed number
curmsk = PACKMSK << shf;
// remove the old value
acc &= ~curmsk;
// ensure caller doesn't pass us a bad value
nval = newval;
#if 0
nval &= PACKMSK;
#endif
nval <<= shf;
// add in the value
acc |= nval;
*(acc_t *) ary = acc;
}
return oldval;
}
pcknum_t
int_get(byte *ary,aryoff_t idx)
{
return packary(ary,idx,0,0);
}
void
int_set(byte *ary,aryoff_t idx,pcknum_t newval)
{
packary(ary,idx,1,newval);
}
Here are benchmarks:
set: 354740751 7.095 -- gene
set: 203407176 4.068 -- rcgldr
set: 298946533 5.979 -- craig
get: 268574627 5.371 -- gene
get: 166839767 3.337 -- rcgldr
get: 207764612 4.155 -- craig

Use of Murmurhash in C

I am in the process of implementing a hash table and hence hash function in C and heard that Murmurhash was a suitably fast algorithm for this purpose. Looking up some C code for this provided:
uint32_t murmur3_32(const char *key, uint32_t len, uint32_t seed) {
static const uint32_t c1 = 0xcc9e2d51;
static const uint32_t c2 = 0x1b873593;
static const uint32_t r1 = 15;
static const uint32_t r2 = 13;
static const uint32_t m = 5;
static const uint32_t n = 0xe6546b64;
uint32_t hash = seed;
const int nblocks = len / 4;
const uint32_t *blocks = (const uint32_t *) key;
int i;
for (i = 0; i < nblocks; i++) {
uint32_t k = blocks[i];
k *= c1;
k = (k << r1) | (k >> (32 - r1));
k *= c2;
hash ^= k;
hash = ((hash << r2) | (hash >> (32 - r2))) * m + n;
}
const uint8_t *tail = (const uint8_t *) (key + nblocks * 4);
uint32_t k1 = 0;
switch (len & 3) {
case 3:
k1 ^= tail[2] << 16;
case 2:
k1 ^= tail[1] << 8;
case 1:
k1 ^= tail[0];
k1 *= c1;
k1 = (k1 << r1) | (k1 >> (32 - r1));
k1 *= c2;
hash ^= k1;
}
hash ^= len;
hash ^= (hash >> 16);
hash *= 0x85ebca6b;
hash ^= (hash >> 13);
hash *= 0xc2b2ae35;
hash ^= (hash >> 16);
return hash;
}
I was wondering if I could clarify a few things with regard to the arguments that are being passed here. "Key" is obviously the string that you are hashing. If this is defined in a struct as having an array length of 46, would this be the value that I would pass as "length" in the above function? The argument "seed", I take it this can be any arbitrary value as long it stays constant between hash calls? Are there any other parameters that I need to change keeping in mind that I am working on a 32-bit machine?
I take it I will also need to modulo the return hash by the size of my hash table?
In addition, if anyone could recommend a superior/faster alternative hash function used for strings then that would be much appreciated
Thanks in advance
About the question regarding the parameters: yes, just read the code, your assumptions are correct.
You don't need modulo as long as the size of your hash table is a power of 2. Then you can just use a bitmask, e.g. (pseudocode)
void* hashtbl[1<<8]; /* 256 */
int key = hash(value, ...) & ((1<<8) - 1); /* 0xff */
Then keep in mind that performance is not the only relevant characteristic of a hash function. It's very important to get an equal distribution of the whole key space. I can't tell you how "good" murmurhash is in that respect, but probably much better than a very simple hashing I used resently for playing around a bit:
static unsigned int
hash(const void *key, size_t keyLen, unsigned int hashmask)
{
size_t i;
unsigned int h = 5381;
for (i=0; i<keyLen; ++i)
{
h += (h << 5) + ((const unsigned char *)key)[i];
}
return h & hashmask;
}
although this simple function is probably faster. It's a tradeoff and a "clever" hashing algorithm tries to be as fast as possible while still giving good distribution. The simplistic function above doesn't really give good distribution, for example it will never use the whole key space for small input (less than 5 bytes).

how to make a bit-set/byte-array conversion in c

Given an array,
unsigned char q[32]="1100111...",
how can I generate a 4-bytes bit-set, unsigned char p[4], such that, the bit of this bit-set, equals to value inside the array, e.g., the first byte p[0]= "q[0] ... q[7]"; 2nd byte p[1]="q[8] ... q[15]", etc.
and also how to do it in opposite, i.e., given bit-set, generate the array?
my own trial out for the first part.
unsigned char p[4]={0};
for (int j=0; j<N; j++)
{
if (q[j] == '1')
{
p [j / 8] |= 1 << (7-(j % 8));
}
}
Is the above right? any conditions to check? Is there any better way?
EDIT - 1
I wonder if above is efficient way? As the array size could be upto 4096 or even more.
First, Use strtoul to get a 32-bit value. Then convert the byte order to big-endian with htonl. Finally, store the result in your array:
#include <arpa/inet.h>
#include <stdlib.h>
/* ... */
unsigned char q[32] = "1100111...";
unsigned char result[4] = {0};
*(unsigned long*)result = htonl(strtoul(q, NULL, 2));
There are other ways as well.
But I lack <arpa/inet.h>!
Then you need to know what byte order your platform is. If it's big endian, then htonl does nothing and can be omitted. If it's little-endian, then htonl is just:
unsigned long htonl(unsigned long x)
{
x = (x & 0xFF00FF00) >> 8) | (x & 0x00FF00FF) << 8);
x = (x & 0xFFFF0000) >> 16) | (x & 0x0000FFFF) << 16);
return x;
}
If you're lucky, your optimizer might see what you're doing and make it into efficient code. If not, well, at least it's all implementable in registers and O(log N).
If you don't know what byte order your platform is, then you need to detect it:
typedef union {
char c[sizeof(int) / sizeof(char)];
int i;
} OrderTest;
unsigned long htonl(unsigned long x)
{
OrderTest test;
test.i = 1;
if(!test.c[0])
return x;
x = (x & 0xFF00FF00) >> 8) | (x & 0x00FF00FF) << 8);
x = (x & 0xFFFF0000) >> 16) | (x & 0x0000FFFF) << 16);
return x;
}
Maybe long is 8 bytes!
Well, the OP implied 4-byte inputs with their array size, but 8-byte long is doable:
#define kCharsPerLong (sizeof(long) / sizeof(char))
unsigned char q[8 * kCharsPerLong] = "1100111...";
unsigned char result[kCharsPerLong] = {0};
*(unsigned long*)result = htonl(strtoul(q, NULL, 2));
unsigned long htonl(unsigned long x)
{
#if kCharsPerLong == 4
x = (x & 0xFF00FF00UL) >> 8) | (x & 0x00FF00FFUL) << 8);
x = (x & 0xFFFF0000UL) >> 16) | (x & 0x0000FFFFUL) << 16);
#elif kCharsPerLong == 8
x = (x & 0xFF00FF00FF00FF00UL) >> 8) | (x & 0x00FF00FF00FF00FFUL) << 8);
x = (x & 0xFFFF0000FFFF0000UL) >> 16) | (x & 0x0000FFFF0000FFFFUL) << 16);
x = (x & 0xFFFFFFFF00000000UL) >> 32) | (x & 0x00000000FFFFFFFFUL) << 32);
#else
#error Unsupported word size.
#endif
return x;
}
For char that isn't 8 bits (DSPs like to do this), you're on your own. (This is why it was a Big Deal when the SHARC series of DSPs had 8-bit bytes; it made it a LOT easier to port existing code because, face it, C does a horrible job of portability support.)
What about arbitrary length buffers? No funny pointer typecasts, please.
The main thing that can be improved with the OP's version is to rethink the loop's internals. Instead of thinking of the output bytes as a fixed data register, think of it as a shift register, where each successive bit is shifted into the right (LSB) end. This will save you from all those divisions and mods (which, hopefully, are optimized away to bit shifts).
For sanity, I'm ditching unsigned char for uint8_t.
#include <stdint.h>
unsigned StringToBits(const char* inChars, uint8_t* outBytes, size_t numBytes,
size_t* bytesRead)
/* Converts the string of '1' and '0' characters in `inChars` to a buffer of
* bytes in `outBytes`. `numBytes` is the number of available bytes in the
* `outBytes` buffer. On exit, if `bytesRead` is not NULL, the value it points
* to is set to the number of bytes read (rounding up to the nearest full
* byte). If a multiple of 8 bits is not read, the last byte written will be
* padded with 0 bits to reach a multiple of 8 bits. This function returns the
* number of padding bits that were added. For example, an input of 11 bits
* will result `bytesRead` being set to 2 and the function will return 5. This
* means that if a nonzero value is returned, then a partial byte was read,
* which may be an error.
*/
{ size_t bytes = 0;
unsigned bits = 0;
uint8_t x = 0;
while(bytes < numBytes)
{ /* Parse a character. */
switch(*inChars++)
{ '0': x <<= 1; ++bits; break;
'1': x = (x << 1) | 1; ++bits; break;
default: numBytes = 0;
}
/* See if we filled a byte. */
if(bits == 8)
{ outBytes[bytes++] = x;
x = 0;
bits = 0;
}
}
/* Padding, if needed. */
if(bits)
{ bits = 8 - bits;
outBytes[bytes++] = x << bits;
}
/* Finish up. */
if(bytesRead)
*bytesRead = bytes;
return bits;
}
It's your responsibility to make sure inChars is null-terminated. The function will return on the first non-'0' or '1' character it sees or if it runs out of output buffer. Some example usage:
unsigned char q[32] = "1100111...";
uint8_t buf[4];
size_t bytesRead = 5;
if(StringToBits(q, buf, 4, &bytesRead) || bytesRead != 4)
{
/* Partial read; handle error here. */
}
This just reads 4 bytes, and traps the error if it can't.
unsigned char q[4096] = "1100111...";
uint8_t buf[512];
StringToBits(q, buf, 512, NULL);
This just converts what it can and sets the rest to 0 bits.
This function could be done better if C had the ability to break out of more than one level of loop or switch; as it stands, I'd have to add a flag value to get the same effect, which is clutter, or I'd have to add a goto, which I simply refuse.
I don't think that will quite work. You are comparing each "bit" to 1 when it should really be '1'. You can also make it a bit more efficient by getting rid of the if:
unsigned char p[4]={0};
for (int j=0; j<32; j++)
{
p [j / 8] |= (q[j] == `1`) << (7-(j % 8));
}
Going in reverse is pretty simple too. Just mask for each "bit" that you set earlier.
unsigned char q[32]={0};
for (int j=0; j<32; j++) {
q[j] = p[j / 8] & ( 1 << (7-(j % 8)) ) + '0';
}
You'll notice the creative use of (boolean) + '0' to convert between 1/0 and '1'/'0'.
According to your example it does not look like you are going for readability, and after a (late) refresh my solution looks very similar to Chriszuma except for the lack of parenthesis due to order of operations and the addition of the !! to enforce a 0 or 1.
const size_t N = 32; //N must be a multiple of 8
unsigned char q[N+1] = "11011101001001101001111110000111";
unsigned char p[N/8] = {0};
unsigned char r[N+1] = {0}; //reversed
for(size_t i = 0; i < N; ++i)
p[i / 8] |= (q[i] == '1') << 7 - i % 8;
for(size_t i = 0; i < N; ++i)
r[i] = '0' + !!(p[i / 8] & 1 << 7 - i % 8);
printf("%x %x %x %x\n", p[0], p[1], p[2], p[3]);
printf("%s\n%s\n", q,r);
If you are looking for extreme efficiency, try to use the following techniques:
Replace if by subtraction of '0' (seems like you can assume your input symbols can be only 0 or 1).
Also process the input from lower indices to higher ones.
for (int c = 0; c < N; c += 8)
{
int y = 0;
for (int b = 0; b < 8; ++b)
y = y * 2 + q[c + b] - '0';
p[c / 8] = y;
}
Replace array indices by auto-incrementing pointers:
const char* qptr = q;
unsigned char* pptr = p;
for (int c = 0; c < N; c += 8)
{
int y = 0;
for (int b = 0; b < 8; ++b)
y = y * 2 + *qptr++ - '0';
*pptr++ = y;
}
Unroll the inner loop:
const char* qptr = q;
unsigned char* pptr = p;
for (int c = 0; c < N; c += 8)
{
*pptr++ =
qptr[0] - '0' << 7 |
qptr[1] - '0' << 6 |
qptr[2] - '0' << 5 |
qptr[3] - '0' << 4 |
qptr[4] - '0' << 3 |
qptr[5] - '0' << 2 |
qptr[6] - '0' << 1 |
qptr[7] - '0' << 0;
qptr += 8;
}
Process several input characters simultaneously (using bit twiddling hacks or MMX instructions) - this has great speedup potential!

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