Command handler loading the files however not running them - discord.js

Question

Hi (no expert by all means)
Working with discord.js setting up a command handler, I know the files are being loaded however when I am running them they don't work (run).
Start of my index file
const { prefix, token } = require("./settings/config.json");
const Discord = require("discord.js");
const fs = require("fs");
const bot = new Discord.Client();
bot.commands = new Discord.Collection();
const commandFiles = fs.readdirSync('./commands').filter(file => file.endsWith('.js'));
for (const file of commandFiles) {
const command = require(`./commands/${file}`);
commandFiles.run(bot, message, args);
console.log(`${file} loaded!`);
bot.commands.set(command.name, command);
}
One of the files in the commands folder (which is loads but doesn't run):
const Discord = require("discord.js");
const client = new Discord.Client();
let servericon = ('https://i.imgur.com/foKcByT.png');
module.exports.run = async (bot, message, args) => {
// No Perms Embed
const noPermsErrEmbed = new Discord.MessageEmbed()
.setColor('FF6961')
.setTitle("**error!**")
.setDescription("This command can only be used by staff!")
.setTimestamp()
.setFooter(message.author.tag + " | Peace Keeper", message.author.displayAvatarURL({dynamic: true, size: 1024}))
if(!message.member.hasPermission("MANAGE_MESSAGES")) return message.reply(noPermsErrEmbed).then(msg => msg.delete(5000));
let ancArgs = args.slice(0).join(" ").split('|');
if (args.length >= 3) {
message.delete().then(() => {
const ancEmbed = new Discord.MessageEmbed()
.setColor('#ABDFF2')
.setTitle("** " + ancArgs[0] + " **")
.setDescription(ancArgs[1])
.setTimestamp()
.setThumbnail(servericon)
.setFooter(message.author.tag + " | Peace Keeper", message.author.displayAvatarURL({dynamic: true, size: 1024}))
message.channel.send(ancEmbed);
})
} else {
message.delete().catch();
const ancErrEmbed = new Discord.MessageEmbed()
.setColor('FF6961')
.setTitle("**error!**")
.setDescription("use the correct format: !special-anc <title> | <message>")
.setTimestamp()
.setFooter(message.author.tag + " | Peace Keeper", message.author.displayAvatarURL({dynamic: true, size: 1024}))
message.reply(ancErrEmbed).then(msg => msg.delete({timeout: 10000}));
}
}
module.exports.help = {
name: "special-anc"
}

Answer 1

It won't run the commands because you used the wrong variable to call the run part:
commandFiles.run(bot, message, args);
It should be:
command.run(bot, message, args);
commandFiles is just a list of files so it has nothing to do directly with your commands.
However, there's something wrong with your code.
This is your module.exports object (inside the command variable):
{
run: [AsyncFunction],
help: { name: String }
}
When you use this line bot.commands.set(command.name, command);, it won't work because there's no name property, it should be help.name.