Flink: submitting job failed to deserialize JobGraph - apache-flink

I was trying to submit a Flink job to a cluster:
./bin/flink run -m <ip>:8081 examples/batch/WordCount.jar --input /opt/flink/README.txt
but got the error Failed to deserialize JobGraph:
org.apache.flink.client.program.ProgramInvocationException: Could not retrieve the execution result. (JobID: 6095949ee689e308039dbc62da2bdf03)
at org.apache.flink.client.program.rest.RestClusterClient.submitJob(RestClusterClient.java:255)
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:338)
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:326)
at org.apache.flink.client.program.ContextEnvironment.execute(ContextEnvironment.java:62)
at org.apache.flink.api.java.ExecutionEnvironment.execute(ExecutionEnvironment.java:820)
at org.apache.flink.api.java.DataSet.collect(DataSet.java:413)
at org.apache.flink.api.java.DataSet.print(DataSet.java:1652)
at org.apache.flink.examples.java.wordcount.WordCount.main(WordCount.java:88)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.flink.client.program.PackagedProgram.callMainMethod(PackagedProgram.java:576)
at org.apache.flink.client.program.PackagedProgram.invokeInteractiveModeForExecution(PackagedProgram.java:438)
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:274)
at org.apache.flink.client.cli.CliFrontend.executeProgram(CliFrontend.java:746)
at org.apache.flink.client.cli.CliFrontend.runProgram(CliFrontend.java:273)
at org.apache.flink.client.cli.CliFrontend.run(CliFrontend.java:205)
at org.apache.flink.client.cli.CliFrontend.parseParameters(CliFrontend.java:1010)
at org.apache.flink.client.cli.CliFrontend.lambda$main$10(CliFrontend.java:1083)
at org.apache.flink.runtime.security.NoOpSecurityContext.runSecured(NoOpSecurityContext.java:30)
at org.apache.flink.client.cli.CliFrontend.main(CliFrontend.java:1083)
Caused by: org.apache.flink.runtime.client.JobSubmissionException: Failed to submit JobGraph.
at org.apache.flink.client.program.rest.RestClusterClient.lambda$submitJob$8(RestClusterClient.java:382)
at java.util.concurrent.CompletableFuture.uniExceptionally(CompletableFuture.java:870)
at java.util.concurrent.CompletableFuture$UniExceptionally.tryFire(CompletableFuture.java:852)
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:474)
at java.util.concurrent.CompletableFuture.completeExceptionally(CompletableFuture.java:1977)
at org.apache.flink.runtime.concurrent.FutureUtils.lambda$retryOperationWithDelay$8(FutureUtils.java:263)
at java.util.concurrent.CompletableFuture.uniWhenComplete(CompletableFuture.java:760)
at java.util.concurrent.CompletableFuture$UniWhenComplete.tryFire(CompletableFuture.java:736)
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:474)
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:561)
at java.util.concurrent.CompletableFuture$UniCompose.tryFire(CompletableFuture.java:929)
at java.util.concurrent.CompletableFuture$Completion.run(CompletableFuture.java:442)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: org.apache.flink.runtime.rest.util.RestClientException: [Failed to deserialize JobGraph.]
at org.apache.flink.runtime.rest.RestClient.parseResponse(RestClient.java:389)
at org.apache.flink.runtime.rest.RestClient.lambda$submitRequest$3(RestClient.java:373)
at java.util.concurrent.CompletableFuture.uniCompose(CompletableFuture.java:952)
at java.util.concurrent.CompletableFuture$UniCompose.tryFire(CompletableFuture.java:926)

Turns out it is a compatibility issue, the cluster is Flink 1.8.1 while the CLI and job jar is from Flink 1.9.0. After switching to the same version, it worked.

In my case, the issue was happening because the Flink cluster was not started
./bin/start-cluster.sh

In my case (when I was playing Flink + Beam) it was the issue with version compatibility.
I had some example Beam job which was running on GCP DataFlow but get the mentioned error on Flink 1.15.X + Beam 2.38.X.
When switched to Flink 1.14.X then job run successfully so be careful regarding dependencies.

Related

org.apache.flink.client.program.ProgramInvocationException: The main method caused an error: No ExecutorFactory found to execute the application

I am trying to submit a flink job of version 1.11.3 . The actual application is developed in flink 1.8.1.
Since the Hadoop cluster is 3.2.0 apache I downloaded flink 1.11.3 (flink-1.11.3-bin-scala_2.11.tgz) and tried to submit the job.
while submitting facing the below mentioned exception . I have set the HADOOP parameters :
export HADOOP_CONF_DIR=/etc/hadoop/conf
export HADOOP_CLASSPATH='hadoop classpath'
Is there any changes I need to do it the pom file to overcome this
org.apache.flink.client.program.ProgramInvocationException: The main method caused an error: No ExecutorFactory found to execute the application.
at org.apache.flink.client.program.PackagedProgram.callMainMethod(PackagedProgram.java:302)
at org.apache.flink.client.program.PackagedProgram.invokeInteractiveModeForExecution(PackagedProgram.java:198)
at org.apache.flink.client.ClientUtils.executeProgram(ClientUtils.java:149)
at org.apache.flink.client.cli.CliFrontend.executeProgram(CliFrontend.java:699)
at org.apache.flink.client.cli.CliFrontend.run(CliFrontend.java:232)
at org.apache.flink.client.cli.CliFrontend.parseParameters(CliFrontend.java:916)
at org.apache.flink.client.cli.CliFrontend.lambda$main$10(CliFrontend.java:992)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1730)
at org.apache.flink.runtime.security.contexts.HadoopSecurityContext.runSecured(HadoopSecurityContext.java:41)
at org.apache.flink.client.cli.CliFrontend.main(CliFrontend.java:992)
Caused by: java.lang.IllegalStateException: No ExecutorFactory found to execute the application.
at org.apache.flink.core.execution.DefaultExecutorServiceLoader.getExecutorFactory(DefaultExecutorServiceLoader.java:84)
at org.apache.flink.streaming.api.environment.StreamExecutionEnvironment.executeAsync(StreamExecutionEnvironment.java:1809)
at org.apache.flink.client.program.StreamContextEnvironment.executeAsync(StreamContextEnvironment.java:128)
at org.apache.flink.client.program.StreamContextEnvironment.execute(StreamContextEnvironment.java:76)
at org.apache.flink.streaming.api.environment.StreamExecutionEnvironment.execute(StreamExecutionEnvironment.java:1700)
at org.sapphire.appspayload.StreamingJob.main(StreamingJob.java:214)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.flink.client.program.PackagedProgram.callMainMethod(PackagedProgram.java:288)

org.apache.flink.client.program.ProgramInvocationException: Could not retrieve the execution result

I am trying to start a Flink batch job on an AWS EMR cluster and am getting:
The program finished with the following exception:
org.apache.flink.client.program.ProgramInvocationException: Could not retrieve the execution result. (JobID: c7362754c49bdae8e9a46748d47bc180)
at org.apache.flink.client.program.rest.RestClusterClient.submitJob(RestClusterClient.java:260)
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:486)
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:474)
at org.apache.flink.client.program.ContextEnvironment.execute(ContextEnvironment.java:62)
at com.stolencamerafinder.flink.BatchJob.main(BatchJob.java:69)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.flink.client.program.PackagedProgram.callMainMethod(PackagedProgram.java:529)
at org.apache.flink.client.program.PackagedProgram.invokeInteractiveModeForExecution(PackagedProgram.java:421)
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:426)
at org.apache.flink.client.cli.CliFrontend.executeProgram(CliFrontend.java:804)
at org.apache.flink.client.cli.CliFrontend.runProgram(CliFrontend.java:280)
at org.apache.flink.client.cli.CliFrontend.run(CliFrontend.java:215)
at org.apache.flink.client.cli.CliFrontend.parseParameters(CliFrontend.java:1044)
at org.apache.flink.client.cli.CliFrontend.lambda$main$11(CliFrontend.java:1120)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1844)
at org.apache.flink.runtime.security.HadoopSecurityContext.runSecured(HadoopSecurityContext.java:41)
at org.apache.flink.client.cli.CliFrontend.main(CliFrontend.java:1120)
Caused by: org.apache.flink.runtime.client.JobSubmissionException: Failed to submit JobGraph.
at org.apache.flink.client.program.rest.RestClusterClient.lambda$submitJob$8(RestClusterClient.java:379)
at java.util.concurrent.CompletableFuture.uniExceptionally(CompletableFuture.java:870)
at java.util.concurrent.CompletableFuture$UniExceptionally.tryFire(CompletableFuture.java:852)
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:474)
at java.util.concurrent.CompletableFuture.completeExceptionally(CompletableFuture.java:1977)
at org.apache.flink.runtime.concurrent.FutureUtils.lambda$retryOperationWithDelay$5(FutureUtils.java:213)
at java.util.concurrent.CompletableFuture.uniWhenComplete(CompletableFuture.java:760)
at java.util.concurrent.CompletableFuture$UniWhenComplete.tryFire(CompletableFuture.java:736)
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:474)
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:561)
at java.util.concurrent.CompletableFuture$UniCompose.tryFire(CompletableFuture.java:929)
at java.util.concurrent.CompletableFuture$Completion.run(CompletableFuture.java:442)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.util.concurrent.CompletionException: org.apache.flink.runtime.concurrent.FutureUtils$RetryException: Could not complete the operation. Exception is not retryable.
at java.util.concurrent.CompletableFuture.encodeRelay(CompletableFuture.java:326)
at java.util.concurrent.CompletableFuture.completeRelay(CompletableFuture.java:338)
at java.util.concurrent.CompletableFuture.uniRelay(CompletableFuture.java:911)
at java.util.concurrent.CompletableFuture$UniRelay.tryFire(CompletableFuture.java:899)
... 12 more
Caused by: org.apache.flink.runtime.concurrent.FutureUtils$RetryException: Could not complete the operation. Exception is not retryable.
... 10 more
Caused by: java.util.concurrent.CompletionException: org.apache.flink.runtime.rest.util.RestClientException: [Job submission failed.]
at java.util.concurrent.CompletableFuture.encodeRelay(CompletableFuture.java:326)
at java.util.concurrent.CompletableFuture.completeRelay(CompletableFuture.java:338)
at java.util.concurrent.CompletableFuture.uniRelay(CompletableFuture.java:911)
at java.util.concurrent.CompletableFuture.uniCompose(CompletableFuture.java:953)
at java.util.concurrent.CompletableFuture$UniCompose.tryFire(CompletableFuture.java:926)
... 4 more
Caused by: org.apache.flink.runtime.rest.util.RestClientException: [Job submission failed.]
at org.apache.flink.runtime.rest.RestClient.parseResponse(RestClient.java:310)
at org.apache.flink.runtime.rest.RestClient.lambda$submitRequest$3(RestClient.java:294)
at java.util.concurrent.CompletableFuture.uniCompose(CompletableFuture.java:952)
... 5 more
I have no idea of what the underlying cause is. Where can I find more details on why it went wrong?
On a similar note, I can't find a way of finding the logs for a successful job with Flink / EMR. Any idea?
To find more details, you need more information of the JobManager or ResourceManager. If you are using YARN as the cluster resource management framework, which many developers do, you can access to the ApplciationMatser's logs, which are the logs from JobManager in Flink.
I met the same problem, the reason is that I don't have start the flink cluster.
./bin/start-cluster.sh
i met this problem in my local mac pc, in local mode.
it runs well in maven project, but throws exception above when submitted to flink local cluster.
it was fixed after restarting my macbook

Zeppelin throws java.lang.NullPointerException when starting SparkInterpreter after adding Spark dependencies via Maven

I'm trying to add Spark dependencies via maven by specifying groupId:artifactId:version in Dependencies section in Zeppelin's Interpreter console. Once I saved and executed a spark paragraph. A java.lang.NullPointerException was thrown, full log below
java.lang.NullPointerException
at org.apache.zeppelin.spark.Utils.invokeMethod(Utils.java:44)
at org.apache.zeppelin.spark.Utils.invokeMethod(Utils.java:39)
at org.apache.zeppelin.spark.OldSparkInterpreter.createSparkContext_2(OldSparkInterpreter.java:375)
at org.apache.zeppelin.spark.OldSparkInterpreter.createSparkContext(OldSparkInterpreter.java:364)
at org.apache.zeppelin.spark.OldSparkInterpreter.getSparkContext(OldSparkInterpreter.java:172)
at org.apache.zeppelin.spark.OldSparkInterpreter.open(OldSparkInterpreter.java:740)
at org.apache.zeppelin.spark.SparkInterpreter.open(SparkInterpreter.java:61)
at org.apache.zeppelin.interpreter.LazyOpenInterpreter.open(LazyOpenInterpreter.java:69)
at org.apache.zeppelin.spark.SparkSqlInterpreter.getSparkInterpreter(SparkSqlInterpreter.java:76)
at org.apache.zeppelin.spark.SparkSqlInterpreter.interpret(SparkSqlInterpreter.java:92)
at org.apache.zeppelin.interpreter.LazyOpenInterpreter.interpret(LazyOpenInterpreter.java:103)
at org.apache.zeppelin.interpreter.remote.RemoteInterpreterServer$InterpretJob.jobRun(RemoteInterpreterServer.java:633)
at org.apache.zeppelin.scheduler.Job.run(Job.java:188)
at org.apache.zeppelin.scheduler.FIFOScheduler$1.run(FIFOScheduler.java:140)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:180)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:293)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
I then removed that maven dependencies but the exception didn't disappear.
According to the log, it seems like Zeppelin is unable to start a spark interpreter, so I looked at Spark Interpreter log at zeppelin-interpreter-spark-zeppelin-development-cluster-m.log but nothing was logged when I ran a spark paragraph. Below is a Zeppelin log found in zeppelin-zeppelin-development-cluster-m.log
INFO [2018-08-10 13:24:53,036] ({qtp2110245805-15} VFSNotebookRepo.java[save]:196) - Saving note:2DM9MXZGM
INFO [2018-08-10 13:24:53,053] ({pool-2-thread-2} SchedulerFactory.java[jobStarted]:109) - Job 20180810-111509_373986425 started by scheduler org.apache.zeppelin.interpreter.remote.RemoteInterpreter-spark:shared_process-2DM9MXZGM
INFO [2018-08-10 13:24:53,054] ({pool-2-thread-2} Paragraph.java[jobRun]:380) - Run paragraph [paragraph_id: 20180810-111509_373986425, interpreter: sql, note_id: 2DM9MXZGM, user: anonymous]
WARN [2018-08-10 13:24:58,614] ({pool-2-thread-2} NotebookServer.java[afterStatusChange]:2303) - Job 20180810-111509_373986425 is finished, status: ERROR, exception: null, result: %text java.lang.NullPointerException
at org.apache.zeppelin.spark.Utils.invokeMethod(Utils.java:44)
at org.apache.zeppelin.spark.Utils.invokeMethod(Utils.java:39)
at org.apache.zeppelin.spark.OldSparkInterpreter.createSparkContext_2(OldSparkInterpreter.java:375)
at org.apache.zeppelin.spark.OldSparkInterpreter.createSparkContext(OldSparkInterpreter.java:364)
at org.apache.zeppelin.spark.OldSparkInterpreter.getSparkContext(OldSparkInterpreter.java:172)
at org.apache.zeppelin.spark.OldSparkInterpreter.open(OldSparkInterpreter.java:740)
at org.apache.zeppelin.spark.SparkInterpreter.open(SparkInterpreter.java:61)
at org.apache.zeppelin.interpreter.LazyOpenInterpreter.open(LazyOpenInterpreter.java:69)
at org.apache.zeppelin.spark.SparkSqlInterpreter.getSparkInterpreter(SparkSqlInterpreter.java:76)
at org.apache.zeppelin.spark.SparkSqlInterpreter.interpret(SparkSqlInterpreter.java:92)
at org.apache.zeppelin.interpreter.LazyOpenInterpreter.interpret(LazyOpenInterpreter.java:103)
at org.apache.zeppelin.interpreter.remote.RemoteInterpreterServer$InterpretJob.jobRun(RemoteInterpreterServer.java:633)
at org.apache.zeppelin.scheduler.Job.run(Job.java:188)
at org.apache.zeppelin.scheduler.FIFOScheduler$1.run(FIFOScheduler.java:140)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:180)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:293)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
I found similar posts facing the same issues but they are related to zeppelin unable to connect to Hive. I don't think that's my issue. I also ran spark-shell and it worked fine.
I'm on Google Dataproc image version 1.3.1.
thanks
I've managed to fix it. The problem is I added the following artifact https://mvnrepository.com/artifact/spotify/spark-bigquery/0.2.2-s_2.11 as an external dependency and it might have conflicted with Spark or Zeppelin libs. After removing everything in zeppelin.dep.localrepo which is /usr/lib/zeppelin/local-repo in my case and restart Zeppelin, everything is back to normal.
thanks

Fail to run flink-gelly-examples

I'm running Apache Flink 1.4.2 (Without bundled hadoop) on Mac, and I've managed to run the WordCount example. However, when I try to run the Gelly example following instructions in Runnung Gelly Examples , I stumble into the following error:
java.lang.ClassNotFoundException: org.apache.flink.graph.generator.random.BlockInfo
May I know how can I fix it?
I first started the cluster by
./bin/start-cluster.sh
Starting cluster.
[INFO] 1 instance(s) of jobmanager are already running on myhostname.
Starting jobmanager daemon on host myhostname.
[INFO] 1 instance(s) of taskmanager are already running on myhostname.
Starting taskmanager daemon on host myhostname.
Then in another terminal, I run
./bin/flink run examples/gelly/flink-gelly-examples_2.11-1.4.2.jar --algorithm GraphMetrics --order directed --input RMatGraph --type integer --scale 20 --simplify directed --output print
and the following errors
Cluster configuration: Standalone cluster with JobManager at localhost/127.0.0.1:6123
Using address localhost:6123 to connect to JobManager.
JobManager web interface address http://localhost:8081
Starting execution of program
Submitting job with JobID: 099acb25fa34be1fe63fb47296605f69. Waiting for job completion.
Connected to JobManager at Actor[akka.tcp://flink#localhost:6123/user/jobmanager#57507119] with leader session id 00000000-0000-0000-0000-000000000000.
------------------------------------------------------------
The program finished with the following exception:
org.apache.flink.client.program.ProgramInvocationException: The program execution failed: Failed to submit job 099acb25fa34be1fe63fb47296605f69 (RMatGraph (s20e16d) ⇨ GraphMetrics ⇨ Hash [integer])
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:492)
at org.apache.flink.client.program.StandaloneClusterClient.submitJob(StandaloneClusterClient.java:105)
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:456)
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:444)
at org.apache.flink.client.program.ContextEnvironment.execute(ContextEnvironment.java:62)
at org.apache.flink.graph.Runner.execute(Runner.java:452)
at org.apache.flink.graph.Runner.main(Runner.java:507)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.flink.client.program.PackagedProgram.callMainMethod(PackagedProgram.java:525)
at org.apache.flink.client.program.PackagedProgram.invokeInteractiveModeForExecution(PackagedProgram.java:417)
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:396)
at org.apache.flink.client.CliFrontend.executeProgram(CliFrontend.java:802)
at org.apache.flink.client.CliFrontend.run(CliFrontend.java:282)
at org.apache.flink.client.CliFrontend.parseParameters(CliFrontend.java:1054)
at org.apache.flink.client.CliFrontend$1.call(CliFrontend.java:1101)
at org.apache.flink.client.CliFrontend$1.call(CliFrontend.java:1098)
at org.apache.flink.runtime.security.NoOpSecurityContext.runSecured(NoOpSecurityContext.java:30)
at org.apache.flink.client.CliFrontend.main(CliFrontend.java:1098)
Caused by: org.apache.flink.runtime.client.JobExecutionException: Failed to submit job 099acb25fa34be1fe63fb47296605f69 (RMatGraph (s20e16d) ⇨ GraphMetrics ⇨ Hash [integer])
at org.apache.flink.runtime.jobmanager.JobManager.org$apache$flink$runtime$jobmanager$JobManager$$submitJob(JobManager.scala:1325)
at org.apache.flink.runtime.jobmanager.JobManager$$anonfun$handleMessage$1.applyOrElse(JobManager.scala:447)
at scala.runtime.AbstractPartialFunction.apply(AbstractPartialFunction.scala:36)
at org.apache.flink.runtime.LeaderSessionMessageFilter$$anonfun$receive$1.applyOrElse(LeaderSessionMessageFilter.scala:38)
at scala.runtime.AbstractPartialFunction.apply(AbstractPartialFunction.scala:36)
at org.apache.flink.runtime.LogMessages$$anon$1.apply(LogMessages.scala:33)
at org.apache.flink.runtime.LogMessages$$anon$1.apply(LogMessages.scala:28)
at scala.PartialFunction$class.applyOrElse(PartialFunction.scala:123)
at org.apache.flink.runtime.LogMessages$$anon$1.applyOrElse(LogMessages.scala:28)
at akka.actor.Actor$class.aroundReceive(Actor.scala:502)
at org.apache.flink.runtime.jobmanager.JobManager.aroundReceive(JobManager.scala:122)
at akka.actor.ActorCell.receiveMessage(ActorCell.scala:526)
at akka.actor.ActorCell.invoke(ActorCell.scala:495)
at akka.dispatch.Mailbox.processMailbox(Mailbox.scala:257)
at akka.dispatch.Mailbox.run(Mailbox.scala:224)
at akka.dispatch.Mailbox.exec(Mailbox.scala:234)
at scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
at scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)
at scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)
at scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)
Caused by: java.lang.ClassNotFoundException: org.apache.flink.graph.generator.random.BlockInfo
at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at org.apache.flink.runtime.execution.librarycache.FlinkUserCodeClassLoaders$ChildFirstClassLoader.loadClass(FlinkUserCodeClassLoaders.java:115)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:348)
at org.apache.flink.util.InstantiationUtil$ClassLoaderObjectInputStream.resolveClass(InstantiationUtil.java:73)
at java.io.ObjectInputStream.readNonProxyDesc(ObjectInputStream.java:1859)
at java.io.ObjectInputStream.readClassDesc(ObjectInputStream.java:1745)
at java.io.ObjectInputStream.readClass(ObjectInputStream.java:1710)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1550)
at java.io.ObjectInputStream.readObject(ObjectInputStream.java:427)
at java.util.HashSet.readObject(HashSet.java:341)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at java.io.ObjectStreamClass.invokeReadObject(ObjectStreamClass.java:1158)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2169)
at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2060)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1567)
at java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:2278)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:2202)
at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:2060)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1567)
at java.io.ObjectInputStream.readObject(ObjectInputStream.java:427)
at org.apache.flink.util.InstantiationUtil.deserializeObject(InstantiationUtil.java:437)
at org.apache.flink.util.InstantiationUtil.deserializeObject(InstantiationUtil.java:424)
at org.apache.flink.util.InstantiationUtil.deserializeObject(InstantiationUtil.java:412)
at org.apache.flink.util.SerializedValue.deserializeValue(SerializedValue.java:58)
at org.apache.flink.runtime.jobmanager.JobManager.org$apache$flink$runtime$jobmanager$JobManager$$submitJob(JobManager.scala:1253)
... 19 more
This particular error shows up because when you have copied the jar files to the lib/ folder, but didn't stop and start the flink cluster against after doing the copy (i.e. you had the cluster running before you performed the copy).
If you stop and start the cluster using ./bin/stop-cluster.sh and ./bin/start-cluster.sh after copying the jar files to the lib folder as mentioned on this page the problem gets fixed.
Also that's probably why you didn't get the error with new installation because you copied the jar files to the lib folder before starting the flink cluster.

how to handle execution timeout in flink

Connected to JobManager at Actor[akka.tcp://flink#localhost:6123/user/jobmanager#-1119198862] with leader session id 00000000-0000-0000-0000-000000000000.
org.apache.flink.client.program.ProgramInvocationException: The program execution failed: Couldn't retrieve the JobExecutionResult from the JobManager.
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:478)
at org.apache.flink.client.program.StandaloneClusterClient.submitJob(StandaloneClusterClient.java:105)
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:442)
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:429)
at org.apache.flink.client.program.ContextEnvironment.execute(ContextEnvironment.java:62)
at FileSetWordCount.main(FileSetWordCount.java:178)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.flink.client.program.PackagedProgram.callMainMethod(PackagedProgram.java:528)
at org.apache.flink.client.program.PackagedProgram.invokeInteractiveModeForExecution(PackagedProgram.java:419)
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:381)
at org.apache.flink.client.CliFrontend.executeProgram(CliFrontend.java:838)
at org.apache.flink.client.CliFrontend.run(CliFrontend.java:259)
at org.apache.flink.client.CliFrontend.parseParameters(CliFrontend.java:1086)
at org.apache.flink.client.CliFrontend$2.call(CliFrontend.java:1133)
at org.apache.flink.client.CliFrontend$2.call(CliFrontend.java:1130)
at org.apache.flink.runtime.security.HadoopSecurityContext$1.run(HadoopSecurityContext.java:43)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1556)
at org.apache.flink.runtime.security.HadoopSecurityContext.runSecured(HadoopSecurityContext.java:40)
at org.apache.flink.client.CliFrontend.main(CliFrontend.java:1130)
Caused by: org.apache.flink.runtime.client.JobExecutionException: Couldn't retrieve the JobExecutionResult from the JobManager.
at org.apache.flink.runtime.client.JobClient.awaitJobResult(JobClient.java:309)
at org.apache.flink.runtime.client.JobClient.submitJobAndWait(JobClient.java:396)
at org.apache.flink.client.program.ClusterClient.run(ClusterClient.java:467)
... 23 more
Caused by: org.apache.flink.runtime.client.JobClientActorSubmissionTimeoutException: Job submission to the JobManager timed out. You may increase 'akka.client.timeout' in case the JobManager needs more time to configure and confirm the job submission.
at org.apache.flink.runtime.client.JobSubmissionClientActor.handleCustomMessage(JobSubmissionClientActor.java:119)
at org.apache.flink.runtime.client.JobClientActor.handleMessage(JobClientActor.java:251)
at org.apache.flink.runtime.akka.FlinkUntypedActor.handleLeaderSessionID(FlinkUntypedActor.java:89)
at org.apache.flink.runtime.akka.FlinkUntypedActor.onReceive(FlinkUntypedActor.java:68)
at akka.actor.UntypedActor$$anonfun$receive$1.applyOrElse(UntypedActor.scala:167)
at akka.actor.Actor$class.aroundReceive(Actor.scala:467)
at akka.actor.UntypedActor.aroundReceive(UntypedActor.scala:97)
at akka.actor.ActorCell.receiveMessage(ActorCell.scala:516)
at akka.actor.ActorCell.invoke(ActorCell.scala:487)
at akka.dispatch.Mailbox.processMailbox(Mailbox.scala:238)
at akka.dispatch.Mailbox.run(Mailbox.scala:220)
at akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec(AbstractDispatcher.scala:397)
at scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
at scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)
at scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)
at scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)
No JobSubmissionResult returned, please make sure you called ExecutionEnvironment.execute()
This is an exception threw by Flink. How to handle the client timeout exception? This Flink application is going to run in the local envirionment. The application is used for about 1TB files processing.
I have figure it out. It is necessary to modify the 'flink-conf.yaml' file with adding a new line "akka.client.timeout: xx s"(e.g. "akka.client.timeout: 600 s").

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