Segmentation fault on calling pthread_create, passing a struct - c

I am working on something that needs pthread usage. Basically, I want to find the max on a matrix, but instead of doing all the work single-processed, I use pthreads to break it.
I use one struct, as defined below to enter multiple values to the findMaxPerArea function. The problem occurs, when I call pthread_create(...); there at the last line. The printf before it passes just fine.
Please don't be too hard on me, because I know this MUST be a stupid mistake. Any thoughts?
struct inputData{
int ** array;
int start, stop, cols, threadID;
int* localmax;
};
void* findMaxPerArea(void* tmp){
struct inputData* inp = (struct inputData*) tmp;
inp->localmax[inp->threadID] = 0;
int i, j;
for(i = inp->start; i < inp->stop; i++){
for(j = 0; j < inp->cols; j++){
if(inp->array[i][j] > inp->localmax[inp->threadID]) inp->localmax[inp->threadID] = inp->array[i][j];
}
}
}
int main(){
int N, p;
printf("Give me the number of threads\n");
scanf("%d", &p);
printf("Give me the number of rows and columns (one value)\n");
scanf("%d", &N);
int* localmax = malloc(p * sizeof(int));
pthread_t* threadArr = (pthread_t*) malloc(p*sizeof(pthread_t));
int** a = malloc(N * sizeof(int*));
for (int i = 0; i < N; i++) {
a[i] = malloc(N * sizeof(int));
}
for(int i = 0; i < N; i++){
for(int j = 0; j < N; j++){
a[i][j] = 5;
}
}
a[0][1] = 8;
a[1][1] = 13;
struct inputData* inputArray = (struct inputData*) malloc(p * sizeof(struct inputData));
for(int i = 0; i < p; i++){
inputArray[i].array = a;
inputArray[i].start = i*(N/p);
inputArray[i].stop = (N/p)*(i+1) - 1;
inputArray[i].cols = N;
inputArray[i].threadID = i;
inputArray[i].localmax = localmax;
printf("It passes this\n");
pthread_create((pthread_t*)threadArr[i], NULL, findMaxPerArea, (void*)&inputArray[i]);
}}

pthread_create((pthread_t*)threadArr[i], NULL, findMaxPerArea, (void*)&inputArray[i]);
Casting threadArr[i] to pthread_t* makes no sense, since you cast a value to a pointer. You instead want to omit the cast completely (since you're already dealing with an array of pthread_ts) and take the address of the ith element:
&threadArr[i]

Related

C allocate 'array pointer' inside a function

Related to dynamic allocation inside a function, most questions & answers are based on double pointers.
But I was recommended to avoid using double pointer unless I have to, so I want to allocate a 'array pointer' (not 'array of pointer') and hide it inside a function.
int (*arr1d) = calloc(dim1, sizeof(*arr1d));
int (*arr2d)[dim2] = calloc(dim1, sizeof(*arr2d));
Since the above lines are the typical dynamic-allocation of pointer of array, I tried the following.
#include <stdio.h>
#include <stdlib.h>
int allocateArray1D(int n, int **arr) {
*arr = calloc(n, sizeof(*arr));
for (int i = 0; i < n; i++) {
(*arr)[i] = i;
}
return 0;
}
int allocateArray2D(int nx, int ny, int *(*arr)[ny]) {
*arr[ny] = calloc(nx, sizeof(*arr));
for (int i = 0; i < nx; i++) {
for (int j = 0; j < ny; j++) {
(*arr)[i][j] = 10 * i + j;
}
}
return 0;
}
int main() {
int nx = 3;
int ny = 2;
int *arr1d = NULL; // (1)
allocateArray1D(nx, &arr1d);
int(*arr2d)[ny] = NULL; // (2)
allocateArray2D(nx, ny, &arr2d);
for (int i = 0; i < nx; i++) {
printf("arr1d[%d] = %d \n", i, arr1d[i]);
}
printf("\n");
printf("arr2d \n");
for (int i = 0; i < nx; i++) {
for (int j = 0; j < ny; j++) {
printf(" %d ", arr2d[i][j]);
}
printf("\n");
}
return 0;
}
And the error message already comes during the compilation.
03.c(32): warning #167: argument of type "int (**)[ny]" is incompatible with parameter of type "int *(*)[*]"
allocateArray2D(nx, ny, &arr2d);
^
It is evident from the error message that it has been messed up with the argument types (that I wrote as int *(*arr)[ny]) but what should I have to put there? I tried some variants like int *((*arr)[ny]), but didn't work).
And if I remove the 2D parts, then the code well compiles, and run as expected. But I wonder if this is the right practice, at least for 1D case since there are many examples where the code behaves as expected, but in fact there were wrong or un-standard lines.
Also, the above code is not satisfactory in the first place. I want to even remove the lines in main() that I marked as (1) and (2).
So in the end I want a code something like this, but all with the 'array pointers'.
int **arr2d;
allocateArray2D(nx, ny, arr2d);
How could this be done?
You need to pass the array pointer by reference (not pass an array pointer to an array of int*):
int *(*arr)[ny] -> int (**arr)[ny]
The function becomes:
int allocateArray2D(int nx, int ny, int (**arr)[ny]) {
*arr = calloc(nx, sizeof(int[ny])); // or sizeof(**arr)
for (int i = 0; i < nx; i++) {
for (int j = 0; j < ny; j++) {
(*arr)[i][j] = 10 * i + j;
}
}
return 0;
}
For details, check out Correctly allocating multi-dimensional arrays
Best practices with malloc family is to always check if allocation succeeded and always free() at the end of the program.
As a micro-optimization, I'd rather recommend to use *arr = malloc( sizeof(int[nx][ny]) );, since calloc just creates pointless overhead bloat in the form of zero initialization. There's no use of it here since every item is assigned explicitly anyway.
Wrong parameter type
Strange allocation
Wrong size type
I would return the array as void * too (at least to check if allocation did not fail).
void *allocateArray2D(size_t nx, size_t ny, int (**arr)[ny]) {
//*arr = calloc(nx, sizeof(**arr)); calloc is not needed here as you assign values to the array
*arr = malloc(nx * sizeof(**arr));
for (size_t i = 0; i < nx; i++) {
for (size_t j = 0; j < ny; j++) {
(*arr)[i][j] = 10 * i + j;
}
}
return *arr;
}

Why do I get a segmentation fault by declaring a 2d array in c?

I am new to threads and I have a program that uses threads to find the minimum number out of a 2d array and later on, it finds the distance that the other elements of the array have from the minimum number and stores them in another array.
The user should enter the size of the array and the number of threads he wants to use.
I tried the program below for 1d array and it worked just fine. When I converted it to work for a 2d array it started crashing and throwing a segmentation fault. I, however, cannot find which part of the 2d declaration is wrong.
Any help is really appreciated.
Here is my code:
#include <stdio.h>
#include <stdlib.h>
#include <unistd.h>
#include <sys/wait.h>
#include <string.h>
#include <pthread.h>
struct Parameters
{
// input
int s,p; //n is size of array, p is number of threads
int** array; //array with elements
int start;
int end;
// output
int smallest;
int pos; //position if minimum
int** B; //array that holds the distances
};
void* min(void* args)
{
struct Parameters* p = (struct Parameters*)args;
int **array = p->array;
int **B1 = p->B;
int start = p->start;
int end = p->end;
int smallest = array[start][start];
int pos = p->pos;
int distance;
//find the smallest
for (int i = start; i < end; i++)
{
for(int j = start; j < end; j++)
{
if (array[i][j] < smallest)
{
smallest = array[i][j];
pos = i;
}
}
}
//find the distances
for(int i = 0; i < ((struct Parameters*)args) -> s; i++)
{
for(int j = 0; j < ((struct Parameters*)args) -> s; j++)
{
distance = abs(pos - i);
B1[i][j] = distance;
}
}
params->smallest = smallest;
params->B = B1;
return NULL;
}
int main()
{
int smallest,pos;
int s,p;
struct Parameters *ptr = (struct Parameters *)malloc(sizeof(struct Parameters));
if(ptr == NULL)
{
printf("Not enough. Try again \n");
exit(0);
}
printf("Type s\n");
scanf("%d",&(ptr->s));
printf("Type p\n");
scanf("%d", &(ptr->p));
// declare an array of threads and associated parameter instances
pthread_t threads[(ptr->p)];
struct Parameters thread_parameters[(ptr->p)] ;
int arr[ptr->s][ptr->s];
int B2[ptr->s][ptr->s];
// intialize the array
for(int i=0; i< ptr->s; i++)
{
for(int j=0; j< ptr->s; j++)
{
printf("Type a \n");
scanf("%d",&arr[i][j]);
}
}
// smallest needs to be set to something
smallest = arr[0][0];
// start all the threads
for (int i = 0; i < ptr->p; i++)
{
memcpy(arr, thread_parameters[i].array, sizeof(arr));
thread_parameters[i].s = ptr->s;
memcpy(Bb, thread_parameters[i].B, sizeof(B2));
thread_parameters[i].start = i * (ptr->s / ptr->p);
thread_parameters[i].end = (i+1) * (ptr->s / ptr->p);
pthread_create(&threads[i], NULL, min, &thread_parameters[i]);
}
// wait for all the threads to complete
for (int i = 0; i < ptr->p; i++)
{
pthread_join(threads[i], NULL);
}
// Now aggregate the "smallest" and "largest" results from all thread runs
for (int i = 0; i < ptr->p; i++)
{
if (thread_parameters[i].smallest < smallest)
{
smallest = thread_parameters[i].smallest;
}
}
printf("Smallest is %d\n", smallest);
thread_parameters[ptr->p].B[ptr->s][ptr->s];
for (int i = 0; i < 1; i++)
{
for(int j = 0; j < ptr->s;j++)
{
for(int k = 0; k < ptr->s; k++)
{
printf("Element %d is %d away from min\n",j,thread_parameters[i].B[j][k]);
}
}
}
return 0;
}
Thank you!!
The issue with your code might also come from :
memcpy(arr, thread_parameters[i].array, sizeof(arr));
...
memcpy(Bb, thread_parameters[i].B, sizeof(B2));
as thread_parameters[i].array and thread_parameters[i].B are not allocated, if you are only reading the array it might b fine to only pass them by address
thread_parameters[i].array = arr
but for thread_parameters[i].B you would need to allocate the arrays and perform a deep copy (memcpy would not work)
The below text does not answer the question but does provide some insight on VLA usage
One reason for causing the segmentation with a declaration of a Variable Length Array is that the value is to large to allocate the array on the stack (some compiler choose this option, this choice might have performance reason).
The is not much option to recover cleanly from failure to allocate memory on the stack as there is little way to clean up stack memory during runtime within the same stack context.
You can mitigate the issue by allocating your 2D arrays on the heap instead, some of the strategies are available here(thanks #Lundin) and here.
int** alloc_2d_int_array(size_t rows, size_t cols) {
int **result = malloc(rows * sizeof(int *));
if(result == NULL) {
// could not allocate more memory
return NULL;
}
size_t row_size = cols * sizeof(int);
for(int i=0; i < rows; ++i) {
result[i] = malloc(row_size);
if(result[i] == NULL) {
// could not allocate more memory
// cleanup
return NULL;
}
}
return result;
}
the above implementation have not been tested, but does compile, there are still risk of integer overflow.
Then use the above define function as following:
int **arr = alloc_2d_int_array(ptr->s, ptr->s);
int **B2 = alloc_2d_int_array(ptr->s, ptr->s);
easier implementation (see here(thanks #Lundin))
int **arr = malloc(sizeof(int[ptr->s][ptr->s]);
int **B2 = malloc(sizeof(int[ptr->s][ptr->s]);

Why this counting sort return input instead of sorted table?

I'm writing counting sort in C. N is the number of elements in table which is to be sorted, k is max value that any of this element can be. However, this code, leaves me with the same table as the input. What's wrong?
void countingSort(int *tab, int n, int k) {
int *counters = (int *)malloc(k * sizeof(int));
int *result = (int *)malloc(n * sizeof(int*));
for (int i = 0; i < k; i++) {
counters[i] = 0;
}
for (int i = 0; i < n; i++) {
counters[tab[i]]++;
}
int j = 0;
for (int i = 0; i < k; i++) {
int tmp = counters[i];
while (tmp--) {
result[j] = i;
j++;
}
}
tab = result;
}
There are some problems in your code:
int *result = (int *)malloc(n * sizeof(int*)); uses an incorrect size. The array element type is int, not int*. You should write:
int *result = (int *)malloc(n * sizeof(int));
or better:
int *result = (int *)malloc(n * sizeof(*result));
note also that the cast is useless in C, unlike C++ where it is mandatory:
int *result = malloc(n * sizeof(*result));
you could avoid the extra initializing loop by using calloc():
int *counters = calloc(n, sizeof(*counters));
a major problem: the result array is never returned to the caller: tab = result; just modifies the argument value, not the caller's variable. You should instead use the tab array to store the results directly.
you do not free the arrays, causing memory leaks.
you do not test for allocation success, causing undefined behavior if memory is not available. You should return an error status indicating this potential problem.
Here is a corrected version:
// assuming all entries in tab are > 0 and < k
int countingSort(int *tab, int n, int k) {
int *counters = calloc(k, sizeof(*counters));
if (counters == NULL)
return -1;
for (int i = 0; i < n; i++) {
counters[tab[i]]++;
}
int j = 0;
for (int i = 0; i < k; i++) {
int tmp = counters[i];
while (tmp--) {
tab[j++] = i;
}
}
free(counters);
return 0;
}
You pass tab to the function by pointer. However you need to change not the value, but address of the variable. So you should pass address of the pointer to countingSort.
void countingSort(int **tab, int n, int k)

Multiple C threads not returning correct values

I am trying to multiply two matrices using a different thread for each member of the resultant matrix. I have this code:
struct data{
int p;
int linie[20];
int coloana[20];
};
void *func(void *args){
struct data *st = (struct data *) args;
int c = 0;
for(int k = 0; k < st->p; k++){
c += st->linie[k] * st->coloana[k];
}
char *rez = (char*) malloc(5);
sprintf(rez, "%d", c);
return rez;
}
int main(int argc, char *argv[]){
int n = 2;
int m = 2;
int A[2][2] = {{1, 2},
{4, 5}};
int B[2][2] = {{7, 3},
{7, 5}};
int C[n][m];
char *res[n * m];
char *rez[n * m];
pthread_t threads[n * m];
int count = 0;
for(int i = 0; i < n; i++){
for(int j = 0; j < m; j++){
struct data st;
st.p = 2;
for(int x = 0; x < st.p; x++){
st.linie[x] = A[i][x];
st.coloana[x] = B[x][j];
}
pthread_create(&threads[count], NULL, func, &st);
count++;
}
}
for(int i = 0; i < n * m; i++){
pthread_join(threads[i], (void**) &rez[i]);
printf("%d ", atoi(rez[i]));
}
return 0;
}
But the correct result is never put into rez[i]. For example I get output "63 37 37 37".
The code works perfectly if I don't choose to wait for every thread to finish, i.e. I put that pthread_join right after pthread_create in the nested for loop. What should I do?
Thanks for reading!
Your first threading problem is here:
for(int i = 0; i < n; i++){
for(int j = 0; j < m; j++){
struct data st;
st.p = 2;
for(int x = 0; x < st.p; x++){
st.linie[x] = A[i][x];
st.coloana[x] = B[x][j];
}
pthread_create(&threads[count], NULL, func, &st);
count++;
}
}
All the threads get passed a pointer to the same variable, &st, which goes out of scope after each call to pthread_create(). You need to ensure that each thread gets its own variable, and that the variable lasts until the thread exits.
To fix this, for example, you could try:
struct data st[n * m];
for (int i = 0; i < n; i++)
{
for (int j = 0; j < m; j++)
{
st[count].p = 2;
for (int x = 0; x < st[count].p; x++)
{
st[count].linie[x] = A[i][x];
st[count].coloana[x] = B[x][j];
}
int rc = pthread_create(&threads[count], NULL, func, &st[count]);
if (rc != 0)
…report pthread creation error…
count++;
}
}
This gives each thread its own struct data to work on, and the structure outlasts the pthread_join() loop.
I'm not completely that it is a good scheme to make one copy of the relevant parts of the two arrays for each thread. It's not too painful at size 2x2, but at 20x20, it begins to be painful. The threads should be told which row and column to process, and should be given pointers to the source matrices, and so on. As long as no thread modifies the source matrices, there isn't a problem reading the data.
Updated answer which replaces the previous invalid code related to pthread_join() (as noted by oftigus in a comment) with this working code. There's a reason I normally test before I post!
On the whole, casts like (void **) should be avoided in the pthread_join() loop. One correct working way to handle this is:
for (int i = 0; i < n * m; i++)
{
void *vp;
int rc = pthread_join(threads[i], &vp);
if (rc == 0 && vp != NULL)
{
rez[i] = vp;
printf("(%s) %d ", rez[i], atoi(rez[i]));
free(rez[i]);
}
}
putchar('\n');
This passes a pointer to a void * variable to pthread_join(). If it finds the information for the requested thread, then pthread_join() makes that void * variable hold the value returned by the thread function. This can then be used as shown — note the error handling (though I note that the example in the POSIX specification for pthread_join()ignores the return value from pthread_join() with a (void) cast on the result).
I don't see where you use res or C.
The result I get is:
(21) 21 (13) 13 (63) 63 (37) 37
where the value in parentheses is a string and the value outside is converted by atoi(). That looks like the correct answer for multiplying A by B (in that order).
#include <pthread.h>
#include <stdio.h>
#include <stdlib.h>
struct data
{
int p;
int linie[20];
int coloana[20];
};
static void *func(void *args)
{
struct data *st = (struct data *)args;
int c = 0;
for (int k = 0; k < st->p; k++)
{
c += st->linie[k] * st->coloana[k];
}
char *rez = (char *)malloc(5);
sprintf(rez, "%d", c);
return rez;
}
int main(void)
{
int n = 2;
int m = 2;
int A[2][2] = {{1, 2}, {4, 5}};
int B[2][2] = {{7, 3}, {7, 5}};
char *rez[n * m];
pthread_t threads[n * m];
int count = 0;
struct data st[n * m];
for (int i = 0; i < n; i++)
{
for (int j = 0; j < m; j++)
{
st[count].p = 2;
for (int x = 0; x < st[count].p; x++)
{
st[count].linie[x] = A[i][x];
st[count].coloana[x] = B[x][j];
}
int rc = pthread_create(&threads[count], NULL, func, &st[count]);
if (rc != 0)
{
fprintf(stderr, "Failed to create thread %d for cell C[%d][%d]\n", count, i, j);
exit(1);
}
count++;
}
}
for (int i = 0; i < n * m; i++)
{
void *vp;
int rc = pthread_join(threads[i], &vp);
if (rc == 0 && vp != NULL)
{
rez[i] = vp;
printf("(%s) %d ", rez[i], atoi(rez[i]));
free(rez[i]);
}
}
putchar('\n');
return 0;
}

Memory allocation. 2D array (Void function)

I followed few examples on this forum, but it seems like my program still keeps crashing at some point.
All i want to do is just use a void function for memory allocation.
void alloc(int ***matrix, int n)
{
int i = 0;
for( ; i < n; i++)
{
(*matrix)[i] = (int*)malloc(n * sizeof(int));
}
i = 0;
for( ; i < n; i++)
{
int j = 0;
for( ; j < n; j++)
{
(*matrix)[i][j] = i * j;
}
}
}
//-------------------------------------------------------------------
int main()
{
int n;
int **matrix_pp;
printf("Enter n: ");
scanf("%d", &n);
alloc(&matrix_pp, n);
free(matrix_pp);
return 0;
}
You try to use (*matrix)[i] before it's been allocated. Add:
(*matrix) = malloc(n * sizeof(**matrix));
before your for loop.
Note two things here:
1) Don't cast the result of malloc,
2) use sizeof(*pointer) instead of explicitly writing out the type; this way, if you decide to change the type later, it will still work.
Further, you will need to free all of the allocations you have in a loop as a loop as well; otherwise, you have a memory leak.

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