Unable to load OWL File using OWL API - owl-api

Question

Please help me out with this:
Have used Maven and tried loading Ontology file using OWL API..
Getting errors while running the file:
1st Error :
No implementation for
java.util.Set was
bound. while locating
java.util.Set
for parameter 0 at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.setOntologyStorers(OWLOntologyManagerImpl.java:1279)
at
uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.setOntologyStorers(OWLOntologyManagerImpl.java:1279)
at uk.ac.manchester.cs.owl.owlapi.OWLAPIImplModule.configure(Unknown
Source)
2nd Error :
An exception was caught and reported. Message:
org.semanticweb.owlapi.manchestersyntax.parser.ManchesterOWLSyntaxOntologyParserFactory
cannot be cast to javax.inject.Provider at
org.semanticweb.owlapi.OWLAPIServiceLoaderModule.configure(Unknown
Source)
My code looks like:
File selectedFile = new File("E:\\Pallavi\\Ontology\\Food.owl");
OWLOntologyManager m = OWLManager.createOWLOntologyManager();
IRI inputDocumentIRI = IRI.create(selectedFile);
/* Load an ontology from a document IRI */
OWLOntology ontology = m.loadOntologyFromOntologyDocument(inputDocumentIRI);
/* Report information about the ontology */
System.out.println("Ontology Loaded...");
System.out.println("Document IRI: " + inputDocumentIRI);
System.out.println("Logical IRI : " + ontology.getOntologyID());
System.out.println("Format : " + m.getOntologyFormat(ontology));
m.removeOntology(ontology);
System.out.println("Done");
My pom.xml looks like:
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>com.mycompany</groupId>
<artifactId>TestOWL</artifactId>
<version>1.0-SNAPSHOT</version>
<packaging>jar</packaging>
<build>
<plugins>
<plugin>
<groupId>org.apache.felix</groupId>
<artifactId>maven-bundle-plugin</artifactId>
<version>2.5.3</version>
<extensions>true</extensions>
<configuration>
<instructions>
<Implementation-Title>${project.name}</Implementation-Title>
<Implementation-Vendor>${project.organization.name}</Implementation-Vendor>
<Implementation-Version>${project.version}.${maven.build.timestamp}</Implementation-Version>
<Bundle-SymbolicName>org.semanticweb.owl.owlapi</Bundle-SymbolicName>
<Bundle-Version>${project.version}</Bundle-Version>
<excludeDependencies>groupId=com.google.guava;scope=compile|runtime|provided,
groupId=com.google.inject*;scope=compile|runtime|provided,
groupId=org.slf4j*;scope=compile|runtime|provided</excludeDependencies>
</instructions>
</configuration>
</plugin>
<plugin>
<artifactId>maven-shade-plugin</artifactId>
<version>2.3</version>
<executions>
<execution>
<phase>package</phase>
<configuration>
<artifactSet>
<excludes>
<exclude>org.apache.felix:org.osgi.core</exclude>
<exclude>org.openrdf.sesame:*</exclude>
<exclude>com.fasterxml.jackson.core:*</exclude>
<exclude>com.github.jsonld-java:*</exclude>
<exclude>com.fasterxml.jackson.core:*</exclude>
<exclude>org.apache.httpcomponents:*</exclude>
<exclude>commons-codec:commons-codec:*</exclude>
<exclude>org.slf4j:*</exclude>
<exclude>org.semarglproject:*</exclude>
<exclude>com.google.guava:*</exclude>
<exclude>com.google.inject:*</exclude>
<exclude>javax.inject:*</exclude>
<exclude>aopalliance:*</exclude>
<exclude>com.google.inject.extensions:*</exclude>
<exclude>com.google.code.findbugs:*</exclude>
<exclude>org.slf4j:slf4j-api</exclude>
<exclude>commons-io:*</exclude>
<exclude>org.tukaani:*</exclude>
<exclude>net.sf.trove4j:*</exclude>
</excludes>
</artifactSet>
<transformers>
<transformer/>
</transformers>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
</build>
<dependencies>
<dependency>
<groupId>com.github.ansell.owlapi</groupId>
<artifactId>owlapi-api</artifactId>
<version>3.4.6.2-ansell</version>
</dependency>
<dependency>
<groupId>net.sourceforge.owlapi</groupId>
<artifactId>owlapi-apibinding</artifactId>
<version>5.0.5</version>
</dependency>
<dependency>
<groupId>net.sourceforge.owlapi</groupId>
<artifactId>owlapi-osgidistribution</artifactId>
<version>5.0.5</version>
</dependency>
</dependencies>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<maven.compiler.source>1.8</maven.compiler.source>
<maven.compiler.target>1.8</maven.compiler.target>
</properties>
</project>
Please help me to get rid of these errors

Answer 1

You are excluding necessary dependencies for owlapi, which explains all the injection related errors.
On top of that, you're using owlapi 5 and the Ansell fork of owlapi 3. These will conflict in many areas.
If you are not using OSGi (seems no) drop all dependencies except owlapi-apibinding for 5.0.5 and remove all exclusions. If that does not solve the problem, update the question with the new state of affairs.