Compiling Unix code on Mac - c

We were given course work to create the game Mine Sweeper. We are still early in the semester so this homework shouldn't be too difficult.
We were given header and source files that are to be used for the visual part of the program.
Main problem is that I can't compile these files on my Mac. Here is what I get:
$ gcc mineSweeper.c -I.
Undefined symbols for architecture x86_64:
"_colorPrint", referenced from:
_main in mineSweeper-4b9486.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Also tried this:
$ gcc mineSweeper.c -I. -arch i386
Undefined symbols for architecture i386:
"_colorPrint", referenced from:
_main in mineSweeper-0938b1.o
ld: symbol(s) not found for architecture i386
clang: error: linker command failed with exit code 1 (use -v to see invocation)
gcc version:
gcc --version
Configured with: --prefix=/Library/Developer/CommandLineTools/usr --with-gxx-include-dir=/usr/include/c++/4.2.1
Apple LLVM version 6.0 (clang-600.0.54) (based on LLVM 3.5svn)
Target: x86_64-apple-darwin13.4.0
Thread model: posix
OSX version:
Software OS X 10.9.5 (13F34)
And finally the code we were provided with:
//colorPrint.h
//defines possible colors for the foreground color.
typedef enum
{
FG_Def = 0,
FG_Black = 30,
FG_Red,
FG_Green,
FG_Yellow,
FG_Blue,
FG_Magenta,
FG_Cyan,
FG_White
}fgColor;
//defines possible colors for the background color.
//BG_Def prints with the default background color of the terminal.
typedef enum
{
BG_Def = 0,
BG_Black = 40,
BG_Red,
BG_Green,
BG_Yellow,
BG_Blue,
BG_Magenta,
BG_Cyan,
BG_White
}bgColor;
//defines possible additional attributes for the color printing.
//normally, you would use ATT_Def.
typedef enum
{
ATT_Def = 0,
ATT_Bright = 1,
ATT_Underline = 4,
ATT_Reverse = 7,
ATT_Hidden = 8,
ATT_Scratch = 9
}attribute;
//clears the screen completely.
void clearScreen();
//prints a format string with its arguments (like printf!),
//in the specified foreground color, background color, and attribute.
void colorPrint(fgColor fg, bgColor bg, attribute att, char* format,...);
//colorPrint.c
#include <stdio.h>
#include <colorPrint.h>
#include <stdarg.h>
void clearScreen()
{
printf("\e[1;1H\e[2J");
}
void colorPrint(fgColor fg, bgColor bg, attribute att, char* format,...)
{
va_list args;
if(bg != BG_Def)
printf("\e[%d;%d;%dm",att,fg,bg);
else
printf("\e[%d;%dm",att,fg);
va_start (args, format);
vprintf(format, args);
va_end (args);
printf("\e[0m");
}
There is another header and code for receiving the char from user but I'm assuming linking it is irrelevant.
Any sort of help is welcome.. thanks in advance :)
PS. I also have a PC if it helps to switch to windows.
PPS. I'm keeping VirtualBox as a last resort.

You're trying to compile and link mineSweeper.c into a final executable on its own, but that file is not a complete program, it depends on a function defined in another file.
You either need to compile and link all the files in one step:
gcc mineSweep.c colourPrint.c
or compile each file separately and then link the objects:
gcc -c mineSweeper.c
gcc -c colorPrint.c
gcc mineSweeper.o colorPrint.o
I'm surprised your course didn't explain how to compile programs consisting of more than one file.
A simple makefile will ease the process:
mineSweeper: mineSweeper.o colorPrint.o
$(CC) $^ $(LDLIBS) -o $#

Related

Libsodium on macOS, undefined symbols for x86_64

I'm using an Intel Mac running Catalina 10.15.1
I'm trying to use libsodium using gcc Apple clang version 11.0.0 (clang-1100.0.33.12)
I have both tried to install libsodium via home-brew and manually compile (which was successful), however, when trying to use libsodium I get this error:
Undefined symbols for architecture x86_64:
"_crypto_generichash", referenced from:
_main in sodium-ae2fd0.o
"_sodium_init", referenced from:
_main in sodium-ae2fd0.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
This is the basic code, using libsodium: stable 1.0.18 (bottled), HEAD
1 #include <sodium.h>
2
3 int main(void)
4 {
5
6 sodium_init();
7
8 #define MESSAGE ((const unsigned char *) "Arbitrary data to hash")
9 #define MESSAGE_LEN 22
10
11 unsigned char hash[crypto_generichash_BYTES];
12
13 crypto_generichash(hash, sizeof hash,
14 MESSAGE, MESSAGE_LEN,
15 NULL, 0);
16
17 return 0;
18 }
Any ideas?
The issue is probably not in the libsodium installation, but in the way your example application is compiled.
In order to link a library (besides the C library which is implicitly linked) when compiling a C program, you need to add the -l<library name> flag to the compilation command line:
cc -Wall -W -o example example.c -lsodium

Run C function with CUDA calls in Delphi program

My objective is to have a Delphi( or freepascal) code, that will call the C function func like this one:
The C/Cuda file:
/* this is the "progcuda.cu" file */
#include <stdio.h>
__global__ void foo(int *a, int *b, int *c, int n){
/*
add all the vector's element
*/
}
void func(int *a, int *b, int *c,int n){
int *da,*db,*dc;
cudaMalloc(&da, n*sizeof(int));
cudaMalloc(&db, n*sizeof(int));
cudaMalloc(&dc, n*sizeof(int));
cudaMemcpy(da,a,sizeof(int)*n,cudaMemcpyHostToDevice);
cudaMemcpy(db,b,sizeof(int)*n,cudaMemcpyHostToDevice);
cudaMemcpy(dc,c,sizeof(int)*n,cudaMemcpyHostToDevice);
foo<<<1,256>>>(da,db,dc);
cudaMemcpy(c,dc,sizeof(int),cudaMemcpyDeviceToHost);
/* do other stuff and call another Host and Device functions*/
return;
}
The pascal main file:
// this is the "progpas.pas" file
program progpas;
{$mode objfpc}{$H+}
uses unitpas;
var
...
begin
...
func(a, b, c, len);
...
end.
The pascal unit file:
// this is the "unitpas.pas" file
unit unitpas;
{$link progcuda.o}
interface
uses ctypes;
procedure func(a, b, c : cpint32 , n:cint32); cdecl; external;
procedure foo(a, b, c : cpint32 , n:cint32);cdecl; external;
implementation
end.
I've found this post Programming CUDA using Delphi or FreePascal
, but it shows more a way to program CUDA in delphi.
I don't want to program CUDA in Delphi, I want to program in CUDA in pure C/C++ code and only call that C function in delphi.
What is the problem?
How can I link the .cu code to the delphi one?
I'm using linux ubuntu 16.04 LTS, but I also have CUDA and VS in windows if necessary.
Note: if you guys could explain in detail how to do it, would help ( new to pascal and linking files )
I've already tried to generate the .o object file and link it in free pascal with
$ nvcc progcuda.cu -c -o progcuda.o then $fpc progpas.pas
but it fails at linking.
Note: I've tried once to link a normal .o generated by C code to pascal code, using gcc and freepascal compiler, and it worked, but if I use nvcc instead of gcc and rename the extension to .cu ( still same code), the linking fails.
note: new account in stack overflow, i cannot repply answers yet.
I don't know anything about Delphi and FreePascal, but I do know about CUDA, C and C++, so maybe my solution will also work for you.
I'll be demonstrating it with a simple problem:
Content of f.cu:
int f() { return 42; }
Content of main.c:
extern int f();
int main() {
return f();
}
The following works:
$ gcc -c -xc f.cu # need -xc to tell gcc it's a C file
$ gcc main.c f.o
(no errors emitted)
Now when we try replacing gcc with nvcc:
$ nvcc -c f.cu
$ gcc main.c f.o
/tmp/ccI3tBM1.o: In function `main':
main.c:(.text+0xa): undefined reference to `f'
f.o: In function `__cudaUnregisterBinaryUtil()':
tmpxft_0000704e_00000000-5_f.cudafe1.cpp:(.text+0x52): undefined reference to `__cudaUnregisterFatBinary'
f.o: In function `__nv_init_managed_rt_with_module(void**)':
tmpxft_0000704e_00000000-5_f.cudafe1.cpp:(.text+0x6d): undefined reference to `__cudaInitModule'
f.o: In function `__sti____cudaRegisterAll()':
tmpxft_0000704e_00000000-5_f.cudafe1.cpp:(.text+0xa9): undefined reference to `__cudaRegisterFatBinary'
collect2: error: ld returned 1 exit status
The problem here is that nvcc adds references to some symbols from the CUDA runtime API when compiling f.cu, and these symbols have to be linked to the final executable. My CUDA installation is in /opt/cuda, so I will use that, but you have to replace it with wherever CUDA is installed on your system. So if we link libcudart.so when compiling the library we get:
$ nvcc -c f.cu
$ gcc main.c f.o -L/opt/cuda/lib64 -lcudart
/tmp/ccUeDZcb.o: In function `main':
main.c:(.text+0xa): undefined reference to `f'
collect2: error: ld returned 1 exit status
This looks better, no strange errors, but it's still not finding the function f. That's because nvcc is treating f.cu as a C++ file, so it does name mangling when creating the object file, and we have to specify that we want f to have C, and not C++ linkage (see more here: http://en.cppreference.com/w/cpp/language/language_linkage).
To do that we have to modify f.cu like this:
extern "C" int f() { return 42; }
Now when we do:
$ nvcc -c f.cu
$ gcc main.c f.o -L/opt/cuda/lib64 -lcudart
(no errors emitted)
I hope you manage to modify this to work with your language.
EDIT: I tried a bit more complicated example:
// f.cu
#include <stdio.h>
__global__ void kernel() {
printf("Running kernel\n");
}
extern "C" void f() {
kernel<<<1, 1>>>();
// make sure the kernel completes before exiting
cudaDeviceSynchronize();
}
// main.c
extern void f();
int main() {
f();
return 0;
}
When compiling it I got:
f.o:(.data.DW.ref.__gxx_personality_v0[DW.ref.__gxx_personality_v0]+0x0): undefined reference to `__gxx_personality_v0'
collect2: error: ld returned 1 exit status
To fix it you also need to add the standard C++ libraries to the linker flags:
$ nvcc -c f.cu
$ gcc main.c f.o -L/opt/cuda/lib64 -lcudart -lstdc++
$ ./a.out
Running kernel
I fixed the files as #Goran Flegar explained:
Add extern "C" int func(...); to the .cu file. And then tried to compile/link the .cu code, but with no device calls (yet with device code), and all worked well.
but when i add a device call ( foo<<<Nb,Nt>>>(...) ) and compile with:
$nvcc progcuda.cu -c
$fpc progpas.pas -ofinal.exe -Fl/usr/local/cuda/lib64
i get:
Free Pascal Compiler version 3.0.4 [2017/12/13] for x86_64
Copyright (c) 1993-2017 by Florian Klaempfl and others
Target OS: Linux for x86-64
Compiling prog1.pas
Linking sum.exe
/usr/bin/ld: aviso: link.res contém seções de saída; você se esqueceu -T?
/usr/bin/ld: sum.o: undefined reference to symbol '_Unwind_Resume##GCC_3.0'
//lib/x86_64-linux-gnu/libgcc_s.so.1: error adding symbols: DSO missing from command line
prog1.pas(16,1) Error: Error while linking
prog1.pas(16,1) Fatal: There were 1 errors compiling module, stopping
Fatal: Compilation aborted
Error: /usr/bin/ppcx64 returned an error exitcode
So there's still some missing libs.
Solution:
Found that linking the stdc++ and gcc_s lib to pascal solved the compilation problem.
unit unitpas;
// file "unitpas.pas"
{$LINK progcuda.o}
{$LINKLIB c}
{$LINKLIB cudart}
{$linklib stdc++}
{$linklib gcc_s}
interface
uses ctypes;
function func(x,y: cint32): cint32; cdecl; external;
implementation
end.
Run
$nvcc progcuda.cu -c
$fpc progpas.pas -ofinal.exe -Fl/usr/local/cuda/lib64
and everything works.

How do I compile with external header file in sublime text in C?

I use one header named header.h in main.c.
The function test is announced in header.h and defined in test.c.
However, it says words below even though I use build system as C.
clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated
Undefined symbols for architecture x86_64:
"test(int)", referenced from:
_main in main-a4d82e.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[Finished in 0.6s with exit code 1]
[cmd: ['bash', '-c', 'g++ -Wall -std=c++11 -O2 \'/Users/hanlock/Documents/CODE/TEST/TEST/main.c\' -o \'/Users/hanlock/Documents/CODE/TEST/TEST/main\' && osascript -e \'tell application "Terminal" to activate do script " cd \\"/Users/hanlock/Documents/CODE/TEST/TEST\\" &&start_ms=$(ruby -e \\"puts (Time.now.to_f * 1000).to_i\\")&&clear&&\\"/Users/hanlock/Documents/CODE/TEST/TEST/main\\" &&elapsed_ms=$(($(ruby -e \\"puts (Time.now.to_f * 1000).to_i\\") - start_ms))&& read -p \\"Press Enter to exit($elapsed_ms ms).\\"&&exit"\'']]
[dir: /Users/hanlock/Documents/CODE/TEST/TEST]
[path: /usr/bin:/bin:/usr/sbin:/sbin]
I've read similar questions about this in C++. However, it seems not working in my case.
So, here comes the problem. How can I use external header file with sublime in language C?
Here is the code:
main.c
#include <stdio.h>
#include "./Header.h"
int main(int argc, const char * argv[]) {
test(1);
return 0;
}
header.h
#ifndef Header_h
#define Header_h
int test(int);
#endif
test.c
#include <stdio.h>
int test(int i){
printf("%d\n",i);
return 0;
}
In test.c:
#include "header.h"
In your shell:
gcc -I [dir] test.c
This will include any external header named header.h located in dir.
I hope this answers your question.

Symbol lookup error while running FANN based program

I compiled a simple program:
#include <stdio.h>
#include <floatfann.h>
#include <fann.h>
int main(int argc, char* argv[]) {
struct fann *ann = fann_create_standard(3, 28 * 28, 49, 10);
fann_train_on_file(ann, "train.fann", 200, 10, 0.0001);
fann_save(ann, "trained-1-0.7-3-784-49-10.net");
fann_destroy(ann);
return 0;
}
I get the following error at RUNTIME:
symbol lookup error: /usr/lib/libfann.so.2: undefined symbol: log
The compilation command is:
gcc -lm -lfann train_acc.c -o train_ann
I already read this discussion and this other. I already tried to install, uninstall, remove, update every possible combination of libraries. I tried to download and rebuild the sources from FANN website, I tried to switch from x64 to x86. Still I get the same error.
I am running Ubuntu 13.04 64 bit.
Did you try changing the linking order?
gcc train_acc.c -o train_ann -lm -lfann

How do I link object files in C? Fails with "Undefined symbols for architecture x86_64"

So I'm trying trying to use a function defined in another C (file1.c) file in my file (file2.c). I'm including the header of file1 (file1.h) in order to do this.
However, I keep getting the following error whenever I try to compile my file using gcc:
Undefined symbols for architecture x86_64:
"_init_filenames", referenced from:
_run_worker in cc8hoqCM.o
"_read_list", referenced from:
_run_worker in cc8hoqCM.o
ld: symbol(s) not found for architecture x86_64
I've been told I need to "link the object files together" in order to use the functions from file1 in file2, but I have no clue what that means :(
I assume you are using gcc, to simply link object files do:
$ gcc -o output file1.o file2.o
To get the object-files simply compile using
$ gcc -c file1.c
this yields file1.o and so on.
If you want to link your files to an executable do
$ gcc -o output file1.c file2.c
The existing answers already cover the "how", but I just wanted to elaborate on the "what" and "why" for others who might be wondering.
What a compiler (gcc) does: The term "compile" is a bit of an overloaded term because it is used at a high-level to mean "convert source code to a program", but more technically means to "convert source code to object code". A compiler like gcc actually performs two related, but arguably distinct functions to turn your source code into a program: compiling (as in the latter definition of turning source to object code) and linking (the process of combining the necessary object code files together into one complete executable).
The original error that you saw is technically a "linking error", and is thrown by "ld", the linker. Unlike (strict) compile-time errors, there is no reference to source code lines, as the linker is already in object space.
By default, when gcc is given source code as input, it attempts to compile each and then link them all together. As noted in the other responses, it's possible to use flags to instruct gcc to just compile first, then use the object files later to link in a separate step. This two-step process may seem unnecessary (and probably is for very small programs) but it is very important when managing a very large program, where compiling the entire project each time you make a small change would waste a considerable amount of time.
You could compile and link in one command:
gcc file1.c file2.c -o myprogram
And run with:
./myprogram
But to answer the question as asked, simply pass the object files to gcc:
gcc file1.o file2.o -o myprogram
Add foo1.c , foo2.c , foo3.c and makefile in one folder
the type make in bash
if you do not want to use the makefile, you can run the command
gcc -c foo1.c foo2.c foo3.c
then
gcc -o output foo1.o foo2.o foo3.o
foo1.c
#include <stdio.h>
#include <string.h>
void funk1();
void funk1() {
printf ("\nfunk1\n");
}
int main(void) {
char *arg2;
size_t nbytes = 100;
while ( 1 ) {
printf ("\nargv2 = %s\n" , arg2);
printf ("\n:> ");
getline (&arg2 , &nbytes , stdin);
if( strcmp (arg2 , "1\n") == 0 ) {
funk1 ();
} else if( strcmp (arg2 , "2\n") == 0 ) {
funk2 ();
} else if( strcmp (arg2 , "3\n") == 0 ) {
funk3 ();
} else if( strcmp (arg2 , "4\n") == 0 ) {
funk4 ();
} else {
funk5 ();
}
}
}
foo2.c
#include <stdio.h>
void funk2(){
printf("\nfunk2\n");
}
void funk3(){
printf("\nfunk3\n");
}
foo3.c
#include <stdio.h>
void funk4(){
printf("\nfunk4\n");
}
void funk5(){
printf("\nfunk5\n");
}
makefile
outputTest: foo1.o foo2.o foo3.o
gcc -o output foo1.o foo2.o foo3.o
make removeO
outputTest.o: foo1.c foo2.c foo3.c
gcc -c foo1.c foo2.c foo3.c
clean:
rm -f *.o output
removeO:
rm -f *.o
Since there's no mention of how to compile a .c file together with a bunch of .o files, and this comment asks for it:
where's the main.c in this answer? :/ if file1.c is the main, how do
you link it with other already compiled .o files? – Tom Brito Oct 12
'14 at 19:45
$ gcc main.c lib_obj1.o lib_obj2.o lib_objN.o -o x0rbin
Here, main.c is the C file with the main() function and the object files (*.o) are precompiled. GCC knows how to handle these together, and invokes the linker accordingly and results in a final executable, which in our case is x0rbin.
You will be able to use functions not defined in the main.c but using an extern reference to functions defined in the object files (*.o).
You can also link with .obj or other extensions if the object files have the correct format (such as COFF).

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