Feature selection for sparse and unbalanced high dimensional data - sparse-matrix

I have a highly unbalanced data with very scarce positive labels. The data is very high dimensional. On top of that my features are also very sparse.
So what would be the best way to do feature selection in this case. Any correlation measure rank based like spearmann or pearson correlation will not be a good one. Because most of my labels as well as features are zeros and it might seem that this feature is highly correlated or something even though it is not that much significant.
Any suggestion guys?

SVMs work well for classification of sparse data. By examining the kernel matrix produced you can identify the features that were more important than others and used those for your feature selection.

Related

Comparing the two feature sets

I am working on a classification of two feature sets derived from a dataset. We first obtain two feature matrices derived from two feature extraction methods. Now, I need to compare them. However, the recognition accuracy for two feature sets, reaches almost the same recognition accuracy (using 10-fold cross validation by SVM). My question is:
Is there a way to design a meaningful experiment to show the difference between the two methods? What are your suggestions?
Note: I already saw the similar questions in stackoverflow, however, I am looking for another approach.
You can
Perform a dimensionality reduction on the features in their respective spaces. This will allow you to see differences in the distribution of data points. Kudos if you apply a kernel, being the one used by the SVM (linear kernel otherwise).
Do distribution testing on the features to see if they differ much.
Augment the predictions into an output space, and see distance between the vectors.

Detect multi-dimensional array storage contention

I'm looking for a technique or algorithm that can help with a design idea. Keep in mind that my proposed solution is open for modification, as well.
I have a series of blocks (square and rectangular) that fit into a grid. The grid and the pieces are unique in that some blocks can fit into multiple locations and others can fit only into a limited number of locations. If it helps, think of something like "Battleship" where the pieces have unique connectors which limits their placement.
I imagine this as a multi-dimensional array. Using a sort of collision or storage contention technique I would like to devise the series of solutions where all pieces are able to fit. An optimal solution would be the one which allows the most pieces to fit on the board at any one time.
I have considered Interval Scheduling, a variety of 2D collision detection algorithms, and looked into graph theory (e.g. Flow Network). These all seem to be overkill for the design.
I don't have specific terminology for what I am looking for so searching for a solution is difficult. If I have to brute force this then, OK, but I have to believe there is a more elegant solution.

Does a Decision Network / Decision Forest take into account relationships between inputs

I have experience dealing with Neural Networks, specifically ones of the Back-Propagating nature, and I know that of the inputs passed to the trainer, dependencies between inputs are part of the resulting models knowledge when a hidden layer is introduced.
Is the same true for decision networks?
I have found that information around these algorithms (ID3) etc somewhat hard to find. I have been able to find the actual algorithms, but information such as expected/optimal dataset formats and other overviews are rare.
Thanks.
Decision Trees are actually very easy to provide data to because all they need is a table of data, and which column out of that data what feature (or column) you want to predict on. That data can be discrete or continuous for any feature. Now there are several flavors of decision trees with different support for continuous and discrete values. And they work differently so understanding how each one works can be challenging.
Different decision tree algorithms with comparison of complexity or performance
Depending on the type of algorithm you are interested in it can be hard to find information without reading the actual papers if you want to try and implement it. I've implemented the CART algorithm, and the only option for that was to find the original 200 page book about it. Most of other treatments only discuss ideas like splitting with enough detail, but fail to discuss any other aspect at more than a high level.
As for if they take into account the dependencies between things. I believe it only assumes dependence between each input feature and the prediction feature. If the input was independent from the prediction feature you couldn't use it as a split criteria. But, between other input features I believe they must be independent of each other. I'd have to check the book to ensure that was true or not, but off the top of my head I think that's true.

Algorithm to find related words in a text

I would like to have a word (e.g. "Apple) and process a text (or maybe more). I'd like to come up with related terms. For example: process a document for Apple and find that iPod, iPhone, Mac are terms related to "Apple".
Any idea on how to solve this?
As a starting point: your question relates to text mining.
There are two ways: a statistical approach, and one form natural language processing (nlp).
I do not know much about nlp, but can say something about the statistical approach:
You need some vector space representation of your documents, see
http://en.wikipedia.org/wiki/Vector_space_model
http://en.wikipedia.org/wiki/Document-term_matrix
http://en.wikipedia.org/wiki/Tf%E2%80%93idf
In order to learn semantics, that is: different words mean the same, or one word can have different meanings, you need a large text corpus for learning. As I said this is a statistical approach, so you need lots of samples.
http://www.daviddlewis.com/resources/testcollections/
Maybe you have lots of documents from the context you are going to use. That is the best situation.
You have to retrieve latent factors from this corpus. Most common are:
LSA (http://en.wikipedia.org/wiki/Latent_semantic_analysis)
PLSA (http://en.wikipedia.org/wiki/Probabilistic_latent_semantic_analysis)
nonnegative matrix factorization (http://en.wikipedia.org/wiki/Non-negative_matrix_factorization)
latent dirichlet allocation (http://en.wikipedia.org/wiki/Latent_Dirichlet_allocation)
These methods involve lots of math. Either you dig it, or you have to find good libraries.
I can recommend the following books:
http://www.oreilly.de/catalog/9780596529321/toc.html
http://www.oreilly.de/catalog/9780596516499/index.html
Like all of AI, it's a very difficult problem. You should look into natural language processing to learn about some of the issues.
One very, very simplistic approach can be to build a 2d-table of words, with for each pair of words the average distance (in words) that they appear in the text. Obviously you'll need to limit the maximum distance considered, and possibly the number of words as well. Then, after processing a lot of text you'll have an indicator of how often certain words appear in the same context.
What I would do is get all the words in a text and make a frequency list (how often each word appears). Maybe also add to it a heuristic factor on how far the word is from "Apple". Then read multiple documents, and cross out words that are not common in all the documents. Then prioritize based on the frequency and distance from the keyword. Of course, you will get a lot of garbage and possibly miss some relevant words, but by adjusting the heuristics you should get at least some decent matches.
The technique that you are looking for is called Latent Semantic Analysis (LSA). It is also sometimes called Latent Semantic Indexing. The technique operates on the idea that related concepts occur together in text. It uses statistics to build the word relationships. Given a large enough corpus of documents it will definitely solve your problem of finding related words.
Take a look at vector space models.

Machine learning, best technique

I am new to machine learning. I am familiar with SVM , Neural networks and GA. I'd like to know the best technique to learn for classifying pictures and audio. SVM does a decent job but takes a lot of time. Anyone know a faster and better one? Also I'd like to know the fastest library for SVM.
Your question is a good one, and has to do with the state of the art of classification algorithms, as you say, the election of the classifier depends on your data, in the case of images, I can tell you that there is one method called Ada-Boost, read this and this to know more about it, in the other hand, you can find lots of people are doing some researh, for example in Gender Classification of Faces Using Adaboost [Rodrigo Verschae,Javier Ruiz-del-Solar and Mauricio Correa] they say:
"Adaboost-mLBP outperforms all other Adaboost-based methods, as well as baseline methods (SVM, PCA and PCA+SVM)"
Take a look at it.
If your main concern is speed, you should probably take a look at VW and generally at stochastic gradient descent based algorithms for training SVMs.
if the number of features is large in comparison to the number of the trainning examples
then you should go for logistic regression or SVM without kernel
if the number of features is small and the number of training examples is intermediate
then you should use SVN with gaussian kernel
is the number of features is small and the number of training examples is large
use logistic regression or SVM without kernels .
that's according to the stanford ML-class .
For such task you may need to extract features first. Only after that classification is feasible.
I think feature extraction and selection is important.
For image classification, there are a lot of features such as raw pixels, SIFT feature, color, texture,etc. It would be better choose some suitable for your task.
I'm not familiar with audio classication, but there may be some specturm features, like the fourier transform of the signal, MFCC.
The methods used to classify is also important. Besides the methods in the question, KNN is a reasonable choice, too.
Actually, using what feature and method is closely related to the task.
The method mostly depends on problem at hand. There is no method that is always the fastest for any problem. Having said that, you should also keep in mind that once you choose an algorithm for speed, you will start compromising on the accuracy.
For example- since your trying to classify images, there might a lot of features compared to the number of training samples at hand. In such cases, if you go for SVM with kernels, you could end up over fitting with the variance being too high.
So you would want to choose a method that has a high bias and low variance. Using logistic regression or linear SVM are some ways to do it.
You could also use different types of regularizations or techniques such as SVD to remove the features that do not contribute much to your output prediction and have only the most important ones. In other words, choose the features that have little or no correlation between them. Once you do this, you would be able to speed yup your SVM algorithms without sacrificing the accuracy.
Hope it helps.
there are some good techniques in learning machines such as, boosting and adaboost.
One method of classification is the boosting method. This method will iteratively manipulate data which will then be classified by a particular base classifier on each iteration, which in turn will build a classification model. Boosting uses weighting of each data in each iteration where its weight value will change according to the difficulty level of the data to be classified.
While the method adaBoost is one ensamble technique by using loss function exponential function to improve the accuracy of the prediction made.
I think your question is very open ended, and "best classifier for images" will largely depend on the type of image you want to classify. But in general, I suggest you study convulutional neural networks ( CNN ) and transfer learning, currently these are the state of the art techniques for the problem.
check out pre-trained models of cnn based neural networks from pytorch or tensorflow
Related to images I suggest you also study pre-processing of images, pre-processing techniques are very important to highlight some feature of the image and improve the generalization of the classifier.

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