JDO datanucleus - java.lang.NoSuchMethodError with Jersey/Google App Engine/Maven - google-app-engine

Question

I am trying to set up a simple RESTful API with Jersey running on GAE with JDO access to Google's datastore (also using Maven). After I added JDO support to the datastore, when I hit the API I am now getting this error at runtime w/ details below. My hunch tells me its some versioning issues with the JDO dependencies, but I can't seem to figure it out.
TestJerseyService.java
#Path("/service")
public class TestJerseyService {
#GET
#Path("/test")
#Produces(MediaType.APPLICATION_JSON)
public Person testMethod() {
PersonDaoImp dao = new PersonDaoImp();
return dao.addPerson();
}
}
PersonDaoImp.java
public class PersonDaoImp{
public Person addPerson(){
PersistenceManager pm = PMF.get().getPersistenceManager();
Person p = new Person();
p.setName("TestName");
try {
pm.makePersistent(e);
} finally {
pm.close();
}
return p;
}
PMF.java
import javax.jdo.JDOHelper;
import javax.jdo.PersistenceManagerFactory;
public final class PMF {
private static final PersistenceManagerFactory pmfInstance =
JDOHelper.getPersistenceManagerFactory("transactions-optional");
private PMF() {}
public static PersistenceManagerFactory get() {
return pmfInstance;
}
}
Person.java
import javax.jdo.annotations.IdGeneratorStrategy;
import javax.jdo.annotations.Key;
import javax.jdo.annotations.PersistenceCapable;
import javax.jdo.annotations.Persistent;
import javax.jdo.annotations.PrimaryKey;
#PersistenceCapable(identityType = IdentityType.IDENTITY)
public class Person {
#PrimaryKey
#Persistent(valueStrategy = IdGeneratorStrategy.IDENTITY)
private Key key;
#Persistent
private String name;
public Person(){
}
public String getName() {
return name;
}
public void setName(String name) {
this.name = name;
}
jdoconfig.xml
<?xml version="1.0" encoding="utf-8"?>
<jdoconfig xmlns="http://java.sun.com/xml/ns/jdo/jdoconfig"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://java.sun.com/xml/ns/jdo/jdoconfig http://java.sun.com/xml/ns/jdo/jdoconfig_3_0.xsd">
<persistence-manager-factory name="transactions-optional">
<property name="javax.jdo.PersistenceManagerFactoryClass"
value="org.datanucleus.api.jdo.JDOPersistenceManagerFactory"/>
<property name="javax.jdo.option.ConnectionURL" value="appengine"/>
<property name="javax.jdo.option.NontransactionalRead" value="true"/>
<property name="javax.jdo.option.NontransactionalWrite" value="true"/>
<property name="javax.jdo.option.RetainValues" value="true"/>
<property name="datanucleus.appengine.autoCreateDatastoreTxns" value="true"/>
<property name="datanucleus.appengine.singletonPMFForName" value="true"/>
</persistence-manager-factory>
</jdoconfig>
pom.xml snippets
<dependency>
<groupId>com.google.appengine</groupId>
<artifactId>appengine-api-1.0-sdk</artifactId>
<version>1.8.8</version>
</dependency>
<dependency>
<groupId>com.google.appengine.orm</groupId>
<artifactId>datanucleus-appengine</artifactId>
<version>2.0.1.1</version>
</dependency>
<dependency>
<groupId>javax.jdo</groupId>
<artifactId>jdo-api</artifactId>
<version>3.0.1</version>
</dependency>
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-core</artifactId>
<version>3.0.11</version>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-api-jdo</artifactId>
<version>3.2.7</version>
</dependency>
<plugin>
<groupId>com.google.appengine</groupId>
<artifactId>appengine-maven-plugin</artifactId>
<version>1.8.8</version>
</plugin>
<plugin>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-maven-plugin</artifactId>
<version>3.2.0-release</version>
<configuration>
<api>JDO</api>
<props>${basedir}/datanucleus.properties</props>
<!-- <log4jConfiguration>${basedir}/log4j.properties</log4jConfiguration> -->
<verbose>true</verbose>
</configuration>
<executions>
<execution>
<phase>process-classes</phase>
<goals>
<goal>enhance</goal>
</goals>
</execution>
</executions>
</plugin>
When I hit the */service/test endpoint I get this error:
HTTP ERROR 500
Problem accessing /exercises/test. Reason:
java.lang.NoSuchMethodError: org.datanucleus.NucleusContext.getExecutionContext(Ljava/lang/Object;Ljava/util/Map;)Lorg/datanucleus/ExecutionContext;
Caused by:
org.glassfish.jersey.server.ContainerException: java.lang.NoSuchMethodError: org.datanucleus.NucleusContext.getExecutionContext(Ljava/lang/Object;Ljava/util/Map;)Lorg/datanucleus/ExecutionContext;
at org.glassfish.jersey.servlet.internal.ResponseWriter.rethrow(ResponseWriter.java:230)
at org.glassfish.jersey.servlet.internal.ResponseWriter.failure(ResponseWriter.java:212)
at org.glassfish.jersey.server.ServerRuntime$Responder.process(ServerRuntime.java:401)
at org.glassfish.jersey.server.ServerRuntime$1.run(ServerRuntime.java:243)
at org.glassfish.jersey.internal.Errors$1.call(Errors.java:271)
at org.glassfish.jersey.internal.Errors$1.call(Errors.java:267)
at org.glassfish.jersey.internal.Errors.process(Errors.java:315)
at org.glassfish.jersey.internal.Errors.process(Errors.java:297)
at org.glassfish.jersey.internal.Errors.process(Errors.java:267)
at org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:318)
at org.glassfish.jersey.server.ServerRuntime.process(ServerRuntime.java:211)
at org.glassfish.jersey.server.ApplicationHandler.handle(ApplicationHandler.java:982)
at org.glassfish.jersey.servlet.WebComponent.service(WebComponent.java:359)
at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:372)
at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:335)
at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:218)
at org.mortbay.jetty.servlet.ServletHolder.handle(ServletHolder.java:511)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1166)
at com.google.appengine.api.socket.dev.DevSocketFilter.doFilter(DevSocketFilter.java:74)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at com.google.appengine.tools.development.ResponseRewriterFilter.doFilter(ResponseRewriterFilter.java:123)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at com.google.appengine.tools.development.HeaderVerificationFilter.doFilter(HeaderVerificationFilter.java:34)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at com.google.appengine.api.blobstore.dev.ServeBlobFilter.doFilter(ServeBlobFilter.java:63)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at com.google.apphosting.utils.servlet.TransactionCleanupFilter.doFilter(TransactionCleanupFilter.java:43)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at com.google.appengine.tools.development.StaticFileFilter.doFilter(StaticFileFilter.java:125)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at com.google.appengine.tools.development.DevAppServerModulesFilter.doDirectRequest(DevAppServerModulesFilter.java:368)
at com.google.appengine.tools.development.DevAppServerModulesFilter.doDirectModuleRequest(DevAppServerModulesFilter.java:351)
at com.google.appengine.tools.development.DevAppServerModulesFilter.doFilter(DevAppServerModulesFilter.java:116)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at org.mortbay.jetty.servlet.ServletHandler.handle(ServletHandler.java:388)
at org.mortbay.jetty.security.SecurityHandler.handle(SecurityHandler.java:216)
at org.mortbay.jetty.servlet.SessionHandler.handle(SessionHandler.java:182)
at org.mortbay.jetty.handler.ContextHandler.handle(ContextHandler.java:765)
at org.mortbay.jetty.webapp.WebAppContext.handle(WebAppContext.java:418)
at com.google.appengine.tools.development.DevAppEngineWebAppContext.handle(DevAppEngineWebAppContext.java:97)
at org.mortbay.jetty.handler.HandlerWrapper.handle(HandlerWrapper.java:152)
at com.google.appengine.tools.development.JettyContainerService$ApiProxyHandler.handle(JettyContainerService.java:485)
at org.mortbay.jetty.handler.HandlerWrapper.handle(HandlerWrapper.java:152)
at org.mortbay.jetty.Server.handle(Server.java:326)
at org.mortbay.jetty.HttpConnection.handleRequest(HttpConnection.java:542)
at org.mortbay.jetty.HttpConnection$RequestHandler.headerComplete(HttpConnection.java:923)
at org.mortbay.jetty.HttpParser.parseNext(HttpParser.java:547)
at org.mortbay.jetty.HttpParser.parseAvailable(HttpParser.java:212)
at org.mortbay.jetty.HttpConnection.handle(HttpConnection.java:404)
at org.mortbay.io.nio.SelectChannelEndPoint.run(SelectChannelEndPoint.java:409)
at org.mortbay.thread.QueuedThreadPool$PoolThread.run(QueuedThreadPool.java:582)
Caused by: java.lang.NoSuchMethodError: org.datanucleus.NucleusContext.getExecutionContext(Ljava/lang/Object;Ljava/util/Map;)Lorg/datanucleus/ExecutionContext;
at org.datanucleus.api.jdo.JDOPersistenceManager.<init>(JDOPersistenceManager.java:148)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.newPM(JDOPersistenceManagerFactory.java:845)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.getPersistenceManager(JDOPersistenceManagerFactory.java:821)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.getPersistenceManager(JDOPersistenceManagerFactory.java:802)
at test.dao.PersonDaoImp.addPerson(PersonDaoImp.java:17)
at test.service.TestJerseyService.testMethod(TestJerseyWS.java:22)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at com.google.appengine.tools.development.agent.runtime.Runtime.invoke(Runtime.java:115)
at org.glassfish.jersey.server.model.internal.ResourceMethodInvocationHandlerFactory$1.invoke(ResourceMethodInvocationHandlerFactory.java:81)
at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher$1.run(AbstractJavaResourceMethodDispatcher.java:140)
at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.invoke(AbstractJavaResourceMethodDispatcher.java:158)
at org.glassfish.jersey.server.model.internal.JavaResourceMethodDispatcherProvider$TypeOutInvoker.doDispatch(JavaResourceMethodDispatcherProvider.java:195)
at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.dispatch(AbstractJavaResourceMethodDispatcher.java:101)
at org.glassfish.jersey.server.model.ResourceMethodInvoker.invoke(ResourceMethodInvoker.java:353)
at org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:343)
at org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:102)
at org.glassfish.jersey.server.ServerRuntime$1.run(ServerRuntime.java:237)
... 47 more
Caused by:
java.lang.NoSuchMethodError: org.datanucleus.NucleusContext.getExecutionContext(Ljava/lang/Object;Ljava/util/Map;)Lorg/datanucleus/ExecutionContext;
at org.datanucleus.api.jdo.JDOPersistenceManager.<init>(JDOPersistenceManager.java:148)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.newPM(JDOPersistenceManagerFactory.java:845)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.getPersistenceManager(JDOPersistenceManagerFactory.java:821)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.getPersistenceManager(JDOPersistenceManagerFactory.java:802)
at test.dao.PersonDaoImp.addPerson(PersonDaoImp.java:17)
at test.service.TestJerseyService.testMethod(TestJerseyWS.java:22)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at com.google.appengine.tools.development.agent.runtime.Runtime.invoke(Runtime.java:115)
at org.glassfish.jersey.server.model.internal.ResourceMethodInvocationHandlerFactory$1.invoke(ResourceMethodInvocationHandlerFactory.java:81)
at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher$1.run(AbstractJavaResourceMethodDispatcher.java:140)
at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.invoke(AbstractJavaResourceMethodDispatcher.java:158)
at org.glassfish.jersey.server.model.internal.JavaResourceMethodDispatcherProvider$TypeOutInvoker.doDispatch(JavaResourceMethodDispatcherProvider.java:195)
at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.dispatch(AbstractJavaResourceMethodDispatcher.java:101)
at org.glassfish.jersey.server.model.ResourceMethodInvoker.invoke(ResourceMethodInvoker.java:353)
at org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:343)
at org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:102)
at org.glassfish.jersey.server.ServerRuntime$1.run(ServerRuntime.java:237)
at org.glassfish.jersey.internal.Errors$1.call(Errors.java:271)
at org.glassfish.jersey.internal.Errors$1.call(Errors.java:267)
at org.glassfish.jersey.internal.Errors.process(Errors.java:315)
at org.glassfish.jersey.internal.Errors.process(Errors.java:297)
at org.glassfish.jersey.internal.Errors.process(Errors.java:267)
at org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:318)
at org.glassfish.jersey.server.ServerRuntime.process(ServerRuntime.java:211)
at org.glassfish.jersey.server.ApplicationHandler.handle(ApplicationHandler.java:982)
at org.glassfish.jersey.servlet.WebComponent.service(WebComponent.java:359)
at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:372)
at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:335)
at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:218)
at org.mortbay.jetty.servlet.ServletHolder.handle(ServletHolder.java:511)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1166)
at com.google.appengine.api.socket.dev.DevSocketFilter.doFilter(DevSocketFilter.java:74)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at com.google.appengine.tools.development.ResponseRewriterFilter.doFilter(ResponseRewriterFilter.java:123)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at com.google.appengine.tools.development.HeaderVerificationFilter.doFilter(HeaderVerificationFilter.java:34)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at com.google.appengine.api.blobstore.dev.ServeBlobFilter.doFilter(ServeBlobFilter.java:63)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at com.google.apphosting.utils.servlet.TransactionCleanupFilter.doFilter(TransactionCleanupFilter.java:43)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at com.google.appengine.tools.development.StaticFileFilter.doFilter(StaticFileFilter.java:125)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at com.google.appengine.tools.development.DevAppServerModulesFilter.doDirectRequest(DevAppServerModulesFilter.java:368)
at com.google.appengine.tools.development.DevAppServerModulesFilter.doDirectModuleRequest(DevAppServerModulesFilter.java:351)
at com.google.appengine.tools.development.DevAppServerModulesFilter.doFilter(DevAppServerModulesFilter.java:116)
at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1157)
at org.mortbay.jetty.servlet.ServletHandler.handle(ServletHandler.java:388)
at org.mortbay.jetty.security.SecurityHandler.handle(SecurityHandler.java:216)
at org.mortbay.jetty.servlet.SessionHandler.handle(SessionHandler.java:182)
at org.mortbay.jetty.handler.ContextHandler.handle(ContextHandler.java:765)
at org.mortbay.jetty.webapp.WebAppContext.handle(WebAppContext.java:418)
at com.google.appengine.tools.development.DevAppEngineWebAppContext.handle(DevAppEngineWebAppContext.java:97)
at org.mortbay.jetty.handler.HandlerWrapper.handle(HandlerWrapper.java:152)
at com.google.appengine.tools.development.JettyContainerService$ApiProxyHandler.handle(JettyContainerService.java:485)
at org.mortbay.jetty.handler.HandlerWrapper.handle(HandlerWrapper.java:152)
at org.mortbay.jetty.Server.handle(Server.java:326)
at org.mortbay.jetty.HttpConnection.handleRequest(HttpConnection.java:542)
at org.mortbay.jetty.HttpConnection$RequestHandler.headerComplete(HttpConnection.java:923)
at org.mortbay.jetty.HttpParser.parseNext(HttpParser.java:547)
at org.mortbay.jetty.HttpParser.parseAvailable(HttpParser.java:212)
at org.mortbay.jetty.HttpConnection.handle(HttpConnection.java:404)
at org.mortbay.io.nio.SelectChannelEndPoint.run(SelectChannelEndPoint.java:409)
at org.mortbay.thread.QueuedThreadPool$PoolThread.run(QueuedThreadPool.java:582)

Answer 1

You picked some random version of datanucleus-core and some other random version of datanucleus-api-jdo and expected them to work together, rather than using what documentation/downloads tell you to use.
https://code.google.com/p/datanucleus-appengine/wiki/Compatibility