sscanf function changes the content of another string - c

I am having problems reading strings with sscanf. I have dumbed down the code to focus on the problem. Below is a function in the whole code that is supposed to open a file and read something. But sscanf is acting strangely. For instance I declare a string called atm with the content 'ATOM'. Before the sscanf it prints this string as ATOM while after it is null. What could be the problem? I assume it must be an allocation problem but I could not find it. I tried some suggestions on other topics like replacing %s with other things but it did not help.
void Get (struct protein p, int mode, int type)
{
FILE *fd; //input file
char name[100]="1CMA"; //array for input file name
char string[600]; //the array where each line of the data file is stored when reading
char atm[100]="ATOM";
char begin[4];
int index1 =0;
fd = fopen(name, "r"); // open the input file
if(fd==NULL) {
printf("Error: can't open file.\n");
return 1;
}
if( type==0 ) { //pdb file type
if( mode==0 ) {
while( fgets(string, 600, fd)!=NULL ) {
printf("1 %s\n",atm);
sscanf (string, "%4s", begin );
printf("2 %s \n",atm);
}
}
}
fclose(fd);
free(fd);
free(name);
}

The string begin isn't big enough to hold the four characters that sscanf will read and its \0 terminator. If the \0 is written into atm (depending on where the strings are in memory), atm would be modified. From the sscanf manpage, about the s directive:
s    Matches a sequence of non-white-space characters; the next pointer must be a pointer to character array that is long enough to hold the input sequence and the terminating null byte ('\0'), which is added automatically. The input string stops at white space or at the maximum field width, whichever occurs first.
I was able to reproduce this behavior on my machine, though the exact positioning of the strings in memory was a bit different. By printing the addresses of the strings, though, it is easy to figure exactly what's happening. Here's a minimal example:
#include<stdio.h>
int main() {
char begin[2];
char atm[100]="ATOM";
printf("begin: %p\n", begin);
printf("begin+16: %p\n", begin+16);
printf("atom: %p\n", atm);
printf("1 %s\n",atm);
sscanf("AAAABBBBCCCCDDDD", "%16s", begin);
printf("2 %s \n",atm);
return 0;
}
This produces the output:
$ ./a.out
begin: 0x7fffffffe120
begin+16: 0x7fffffffe130
atom: 0x7fffffffe130
1 ATOM
2
I printed the values of the pointers to figure out how big a string it would take to overflow into atm. Since (on my machine) atom begins at begin+16, reading sixteen characters into begin puts a null terminator at begin+16, which is the first character of atm, so now atm has length 0.

Related

How to scan strings from a text file with delimiter and then display it?

So i tried to make a program that will scan strings from a text file and then display it using loop. But, somehow my program cannot work and it is display weird symbols.. i am new to text file and i would appreciate a lot if someone can explain to me what is wrong with my code.
My code :
#include <stdio.h>
#include <string.h>
int main()
{
FILE *fPtr;
fPtr = fopen("alumni.txt", "r");
if (fPtr == NULL) {
printf("There is a error opening the file.");
exit(-1);
}
char name[20], design[50], category[20], location[20];
while (fscanf(fPtr, "%s:%[^\n]:%[^\n]:%[^\n]", &name, &design, &category, &location) != EOF) {
printf("Name : %s\n", name);
printf("Designation : %s\n", design);
printf("Category : %s\n", category);
printf("Location : %s\n", location);
}
}
and this is my text file,
Shanie:Programmer:Full Time:Kuala Lumpur
Andy:Sales Agent:Part Time:Johor Bahru
Elaine:Database Administrator Full Time Melaka
Stephanie:MIS manager:Full Time:Penang
You have two problems: The first is that %s will read space delimited "words", it won't stop at the :. The second problem is that the format %[^\n] reads all until newline.
So you need a scanset format for the first name as well as tell it to read until the next :, which is done with the format %[^:].
So please change to:
while (fscanf(fPtr, " %19[^:]:%49[^:]:%19[^:]:%19[^\n]", name, design, category, location) == 4) {
...
}
Please note a couple of other changes I made to your call and loop condition: First of all, I have added length specifiers to the formats, so fscanf will not write out of bounds of your arrays.
Secondly both the %s and %[] formats expects a char * argument, while you provided a pointer to arrays (&name will be of type char (*)[20] not char *). Arrays naturally decay to pointers to their first element, so e.g. name will decay to &name[0] which will be of the correct type char *.
Thirdly I changed the comparison to compare against 4, which is what fscanf will return if it successfully parsed the input.
Lastly I added a space before the first format, to skip any leading space (like the newline from the previous line).
To be sure to be able to continue even in the case of malformed input, I recommend you read full lines instead (using e.g. fgets), and then possibly use sscanf to parse each line.

Write a program that takes a user's input and compares it to words in a file

I am in school and got an assignment to write a C program that takes an input from a user then scans a file and returns how many times that word shows up in a file. I feel like I got it 90% done, but for some reason I can't get the while loop. When I run the program it crashes at the while loop. Any help or guidance would be greatly appreciated.
#include <stdio.h>
#include <string.h>
#include <stdlib.h>
#include <windows.h>
int main() {
char input[50], file[50], word[50];
int wordcount;
printf("Enter a string to search for\n");
scanf("%s", input);
printf("Enter a file location to open\n");
scanf("%s", file);
FILE * fp;
fp = fopen("%s", "r", file);
while (fscanf(fp, "%s", word) != EOF) {
if (strcmp(word, input)) {
printf("found the word %s\n", input);
wordcount++;
}
}
printf("The world %s shows up %d times\n", input, wordcount);
system("pause");
}
You have 2 problems:
fp = fopen("%s", "r", file);
is incorrect, fopen expects only two arguments, not three. The correct version
is
fp = fopen(file, "r");
Note that there is no feature in the C language that allows you to construct
strings from variables like this "%s", variable1. This only works for function
like printf that read a format and interpret the format base on a fix set of
rules you can see here.
The second problem is this:
if (strcmp(word, input))
strcmp is used to compared two strings, however it return 0 when the strings
are equal, non-zero otherwise. So the correct check should be
if(strcmp(word, input) == 0)
{
printf("found the word %s\n", input);
wordcount++;
}
One last thing: when you read a string with scanf, you should limit the amount
of characters to be read, otherwise you will overflow the buffer and this yield
undefined behaviour which could lead to a segfault.
input is a char[50], so it can hold at most 49 characters, the better
scanf call would be
scanf("%49s", input);
with this you are making sure not to write beyond the bounds of the array.
Fotenotes
1The string "%s" has no real meaning in the C language, like any
other string it is merly a sequence of characters that ends with the
'\0'-terminating character. The memory layout for this strings is
+---+---+----+
| % | s | \0 |
+---+---+----+
The printf family of functions however give certains sequences of characters
(the ones beginning with %) a well defined meaning. They're used to determine the type of the variable that should
be used when printing as well as other format options. See the printf documentation for more information about that. You have to
remember however, that this type of constructs only works with printf because
printf was design to work this way.
If you need to construct a string using values of other variables, then you need
to have an array with enough space and use a function like sprintf. For
example:
const char *base = "records";
int series = 8;
char fn[100];
sprintf(fn, "%s%d.dat", base, series);
// now fn has the string "records8.dat"
FILE *fp = fopen(fn, "r");
...
But in your case this is unnecessary because the whole filename was already
stored in variable file, so construction a new string based on file is not
needed.
You are trying to open a file named "%s", which I'm pretty sure does not exist. If you had checked the return from fopen, you could have figured it out yourself.

C - Using fgets until newline/-1 [closed]

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So I'm trying to make it so that you can write text into a file until you make a newline or type -1. My problem is that when you write, it just keeps going until it crashes and gives the error "Stack around the variable "inputChoice" was corrupted".
I believe the problem is that the program doesn't stop accepting stdin when you want to stop typing (-1, newline) and that causes the error. I've tried with a simple scanf and it works, but you can only write a word. No spaces and it doesn't support multiple lines either. That's why I have to use fgets
Judging from your comments, I assume that there are some basic concepts in C
that you haven't fully understood, yet.
C-Strings
A C-String is a sequence of bytes. This sequence must end with the value 0.
Every value in the sequence represents a character based on the
ASCII encoding, for example the
character 'a' is 97, 'b' is 98, etc. The character '\0' has
the value 0 and it's the character that determines the end of the string.
That's why you hear a lot that C-Strings are '\0'-terminated.
In C you use an array of chars (char string[], char string[SOME VALUE]) to
save a string. For a string of length n, you need an array of dimension n+1, because
you also need one space for the terminating '\0' character.
When dealing with strings, you always have to think about the proper type,
whether your are using an array or a pointer. A pointer
to char doesn't necessarily mean that you are dealing with a C-String!
Why am I telling you this? Because of:
char inputChoice = 0;
printf("Do you wish to save the Input? (Y/N)\n");
scanf("%s", &inputChoice);
I haven't changed much, got very demotivated after trying for a while.
I changed the %s to an %c at scanf(" %c, &inputChoice) and that
seems to have stopped the program from crashing.
which shows that haven't understood the difference between %s and %c.
The %c conversion specifier character tells scanf that it must match a single character and it expects a pointer to char.
man scanf
c
Matches a sequence of characters whose length is specified by the maximum field
width (default 1); the next pointer must be a
pointer to char, and there must be enough room for all the characters
(no terminating null byte is added). The usual skip of
leading white space is suppressed. To skip white space first, use an explicit space in the format.
Forget the bit about the length, it's not important right now.
The important part is in bold. For the format scanf("%c", the function
expects a pointer to char and its not going to write the terminating '\0'
character, it won't be a C-String. If you want to read one letter and one
letter only:
char c;
scanf("%c", &c);
// also possible, but only the first char
// will have a defined value
char c[10];
scanf("%c", c);
The first one is easy to understand. The second one is more interesting: Here
you have an array of char of dimension 10 (i.e it holds 10 chars). scanf
will match a single letter and write it on c[0]. However the result won't be
a C-String, you cannot pass it to puts nor to other functions that expect
C-Strings (like strcpy).
The %s conversion specifier character tells scanf that it must match a sequence of non-white-space characters
man scanf
s
Matches a sequence of non-white-space characters; the next pointer must be a
pointer to the initial element of a character array that is long enough to
hold the input sequence and the terminating null byte ('\0'), which is added
automatically.
Here the result will be that a C-String is saved. You also have to have enough
space to save the string:
char string[10];
scanf("%s", string);
If the strings matches 9 or less characters, everything will be fine, because
for a string of length 9 requires 10 spaces (never forget the terminating
'\0'). If the string matches more than 9 characters, you won't have enough
space in the buffer and a buffer overflow (accessing beyond the size) occurs.
This is an undefined behaviour and anything can happen: your program might
crash, your program might not crash but overwrites another variable and thus
scrwes the flow of your program, it could even kill a kitten somewhere, do
you really want to kill kittens?
So, do you see why your code is wrong?
char inputChoice = 0;
scanf("%s", &inputChoice);
inputChoice is a char variable, it can only hold 1 value.
&inputChoice gives you the address of the inputChoice variable, but the
char after that is out of bound, if you read/write it, you will have an
overflow, thus you kill a kitten. Even if you enter only 1 character, it will
write at least 2 bytes and because you it only has space for one character, a kitten will die.
So, let's talk about your code.
From the perspective of an user: Why would I want to enter lines of text, possibly a lot of lines of text
and then answer "No, I don't want to save the lines". It doesn't make sense to
me.
In my opinion you should first ask the user whether he/she wants to save the
input first, and then ask for the input. If the user doesn't want to save
anything, then there is no point in asking the user to enter anything at
all. But that's just my opinion.
If you really want to stick to your plan, then you have to save every line and
when the user ends entering data, you ask and you save the file.
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#define BUFFERLEN 1024
void printFile () {
int i;
char openFile[BUFFERLEN];
FILE *file;
printf("What file do you wish to write in?\n");
scanf("%s", openFile);
getchar();
file = fopen(openFile, "w");
if (file == NULL) {
printf("Could not open file.\n");
return;
}
// we save here all lines to be saved
char **lines = NULL;
int num_of_lines = 0;
char buffer[BUFFERLEN];
printf("Enter an empty line of -1 to end input\n");
// for simplicity, we assume that no line will be
// larger than BUFFERLEN - 1 chars
while(fgets(buffer, sizeof buffer, stdin))
{
// we should check if the last character is \n,
// if not, buffer was not large enough for the line
// or the stream closed. For simplicity, I will ignore
// these cases
int len = strlen(buffer);
if(buffer[len - 1] == '\n')
buffer[len - 1] = '\0';
if(strcmp(buffer, "") == 0 || strcmp(buffer, "-1") == 0)
break; // either an empty line or user entered "-1"
char *line = strdup(buffer);
if(line == NULL)
break; // if no more memory
// process all lines that already have been entered
char **tmp = realloc(lines, (num_of_lines+1) * sizeof *tmp);
if(tmp == NULL)
{
free(line);
break; // same reason as for strdup failing
}
lines = tmp;
lines[num_of_lines++] = line; // save the line and increase num_of_lines
}
char inputChoice = 0;
printf("Do you wish to save the Input? (Y/N)\n");
scanf("%c", &inputChoice);
getchar();
if (inputChoice == 'Y' || inputChoice == 'y') {
for(i = 0; i < num_of_lines; ++i)
fprintf(file, "%s\n", lines[i]); // writing every line
printf("Your file has been saved\n");
printf("Please press any key to continue");
getchar();
}
// closing FILE buffer
fclose(file);
// free memory
if(num_of_lines)
{
for(i = 0; i < num_of_lines; ++i)
free(lines[i]);
free(lines);
}
}
int main(void)
{
printFile();
return 0;
}
Remarks on the code
I used the same code as yours as the base for mine, so that you can spot the
differences much quicker.
I use the macro BUFFERLEN for declaring the length of the buffers. That's
my style.
Look at the fgets line:
fgets(buffer, sizeof buffer, stdin)
I use here sizeof buffer instead of 1024 or BUFFERLEN. Again, that's my
style, but I think doing this is better, because even if you change the size
of the buffer by changing the macro, or by using another explicit size, sizeof buffer
will always return the correct size. Be aware that this only works when
buffer is an array.
The function strdup returns a pointer a pointer to a new string that
duplicates the argument. It's used to create a new copy of a string. When
using this function, don't forget that you have to free the memory using
free(). strdup is not part of the standard library, it conforms
to SVr4, 4.3BSD, POSIX.1-2001. If you use Windows (I don't use Windows,
I'm not familiar with the Windows ecosystem), this function might not be
present. In that case you can write your own:
char *strdup(const char *s)
{
char *str = malloc(strlen(s) + 1);
if(str == NULL)
return NULL;
strcpy(str, s);
return str;
}

Storing String Inside a String?

My problem is when I try to save the string (series[0]) Inside (c[0])
and I display it, it always ignore the last digit.
For Example the value of (series[0]) = "1-620"
So I save this value inside (c[0])
and ask the program to display (c[0]), it displays "1-62" and ignores the last digit which is "0". How can I solve this?
This is my code:
#include <stdio.h>
int main(void)
{
int price[20],i=0,comic,j=0;
char name,id,book[20],els[20],*series[20],*c[20];
FILE *rent= fopen("read.txt","r");
while(!feof(rent))
{
fscanf(rent,"%s%s%s%d",&book[i],&els[i],&series[i],&price[i]);
printf("1.%s %s %s %d",&book[i],&els[i],&series[i],price[i]);
i++;
}
c[0]=series[0];
printf("\n%s",&c[0]);
return 0;
}
The use of fscanf and printf is wrong :
fscanf(rent,"%s%s%s%d",&book[i],&els[i],&series[i],&price[i]);
Should be:
fscanf(rent,"%c%c%s%d",&book[i],&els[i],series[i],&price[i]);
You have used the reference operator on a char pointer when scanf expecting a char pointer, also you read a string to book and else instead of one character.
printf("1.%s %s %s %d",&book[i],&els[i],&series[i],price[i]);
Should be:
printf("1.%c %c %s %d",book[i],els[i],series[i],price[i]);
And:
printf("\n%s",&c[0]);
Should be:
printf("\n%s",c[0]);
c is an array of char * so c[i] can point to a string and that is what you want to send to printf function.
*Keep in mind that you have to allocate (using malloc) a place in memory for all the strings you read before sending them to scanf:
e.g:
c[0] = (char*)malloc(sizeof(char)*lengthOfString+1);
and only after this you can read characters in to it.
or you can use a fixed size double character array:
c[10][20];
Now c is an array of 20 strings that can be up to 9 characters long.
Amongst other problems, at the end you have:
printf("\n%s",&c[0]);
There are multiple problems there. The serious one is that c[0] is a char *, so you're passing the address of a char * — a char ** — to printf() but the %s format expects a char *. The minor problem is that you should terminate lines of output with newline.
In general, you have a mess with your memory allocation. You haven't allocated space for char *series[20] pointers to point at, so you get undefined behaviour when you use it.
You need to make sure you've allocated enough space to store the data, and it is fairly clear that you have not done that. One minor difficulty is working out what the data looks like, but it seems to be a series of lines each with 3 words and 1 number. This code does that job a bit more reliably:
#include <stdio.h>
int main(void)
{
int price[20];
int i;
char book[20][32];
char els[20][32];
char series[20][20];
const char filename[] = "read.txt";
FILE *rent = fopen(filename, "r");
if (rent == 0)
{
fprintf(stderr, "Failed to open file '%s' for reading\n", filename);
return 1;
}
for (i = 0; i < 20; i++)
{
if (fscanf(rent, "%31s%31s%19s%d", book[i], els[i], series[i], &price[i]) != 4)
break;
printf("%d. %s %s %s %d\n", i, book[i], els[i], series[i], price[i]);
}
printf("%d titles read\n", i);
fclose(rent);
return 0;
}
There are endless ways this could be tweaked, but as written, it ensures no overflow of the buffers (by the counting loop and input conversion specifications including the length), detects when there is an I/O problem or EOF, and prints data with newlines at the end of the line. It checks and reports if it fails to open the file (including the name of the file — very important when the name isn't hard-coded and a good idea even when it is), and closes the file before exiting.
Since you didn't provide any data, I created some random data:
Tixrpsywuqpgdyc Yeiasuldknhxkghfpgvl 1-967 8944
Guxmuvtadlggwjvpwqpu Sosnaqwvrbvud 1-595 3536
Supdaltswctxrbaodmerben Oedxjwnwxlcvpwgwfiopmpavseirb 1-220 9698
Hujpaffaocnr Teagmuethvinxxvs 1-917 9742
Daojgyzfjwzvqjrpgp Vigudvipdlbjkqjm 1-424 4206
Sebuhzgsqpyidpquzjxswbccqbruqf Vuhssjvcjjylcevcisdzedkzlp 1-581 3451
Doeraxdmyqcbbzyp Litbetmttcgfldbhqqfdxqi 1-221 2485
Raqqctfdlhrmhtzusntvgbvotpk Iowdcqlwgljwlfvwhfmw 1-367 3505
Kooqkvabwemxoocjfaa Hicgkztiqvqdjjx 1-466 435
Lowywyzzkkrazfyjuggidsqfvzzqb Qiginniroivqymgseushahzlrywe 1-704 5514
The output from the code above on that data is:
0. Tixrpsywuqpgdyc Yeiasuldknhxkghfpgvl 1-967 8944
1. Guxmuvtadlggwjvpwqpu Sosnaqwvrbvud 1-595 3536
2. Supdaltswctxrbaodmerben Oedxjwnwxlcvpwgwfiopmpavseirb 1-220 9698
3. Hujpaffaocnr Teagmuethvinxxvs 1-917 9742
4. Daojgyzfjwzvqjrpgp Vigudvipdlbjkqjm 1-424 4206
5. Sebuhzgsqpyidpquzjxswbccqbruqf Vuhssjvcjjylcevcisdzedkzlp 1-581 3451
6. Doeraxdmyqcbbzyp Litbetmttcgfldbhqqfdxqi 1-221 2485
7. Raqqctfdlhrmhtzusntvgbvotpk Iowdcqlwgljwlfvwhfmw 1-367 3505
8. Kooqkvabwemxoocjfaa Hicgkztiqvqdjjx 1-466 435
9. Lowywyzzkkrazfyjuggidsqfvzzqb Qiginniroivqymgseushahzlrywe 1-704 5514
10 titles read

Why fgets is not inputting first value?

I am writing a program to write my html files rapidly. And when I came to write the content of my page I got a problem.
#include<stdio.h>
int main()
{
int track;
int question_no;
printf("\nHow many questions?\t");
scanf("%d",&question_no);
char question[question_no][100];
for(track=1;track<=question_no;track++)
{
printf("\n<div class=\"question\">%d. ",track);
printf("\nQuestion number %d.\t",track);
fgets(question[track-1],sizeof(question[track-1]),stdin);
printf("\n\n\tQ%d. %s </div>",track,question[track-1]);
}
}
In this program I am writing some questions and their answers (in html file). When I test run this program I input the value of question_no to 3. But when I enter my first question it doesn't go in question[0] and consequently the first question doesn't output. The rest of the questions input without issue.
I searched some questions on stackoverflow and found that fgets() looks for last \0 character and that \0 stops it.
I also found that I should use buffer to input well through fgets() so I used: setvbuf and setbuf but that also didn't work (I may have coded that wrong). I also used fflush(stdin) after my first and last (as well) scanf statement to remove any \0 character from stdin but that also didn't work.
Is there any way to accept the first input by fgets()?
I am using stdin and stdout for now. I am not accessing, reading or writing any file.
Use fgets for the first prompt too. You should also malloc your array as you don't know how long it is going to be at compile time.
#include <stdlib.h>
#include <stdio.h>
#define BUFSIZE 8
int main()
{
int track, i;
int question_no;
char buffer[BUFSIZE], **question;
printf("\nHow many questions?\t");
fgets(buffer, BUFSIZE, stdin);
question_no = strtol(buffer, NULL, 10);
question = malloc(question_no * sizeof (char*));
if (question == NULL) {
return EXIT_FAILURE;
}
for (i = 0; i < question_no; ++i) {
question[i] = malloc(100 * sizeof (char));
if (question[i] == NULL) {
return EXIT_FAILURE;
}
}
for(track=1;track<=question_no;track++)
{
printf("\n<div class=\"question\">%d. ",track);
printf("\nQuestion number %d.\t",track);
fgets(question[track-1],100,stdin);
printf("\n\n\tQ%d. %s </div>",track,question[track-1]);
}
for (i = 0; i < question_no; ++i) free(question[i]);
free(question);
return EXIT_SUCCESS;
}
2D arrays in C
A 2D array of type can be represented by an array of pointers to type, or equivalently type** (pointer to pointer to type). This requires two steps.
Using char **question as an exemplar:
The first step is to allocate an array of char*. malloc returns a pointer to the start of the memory it has allocated, or NULL if it has failed. So check whether question is NULL.
Second is to make each of these char* point to their own array of char. So the for loop allocates an array the size of 100 chars to each element of question. Again, each of these mallocs could return NULL so you should check for that.
Every malloc deserves a free so you should perform the process in reverse when you have finished using the memory you have allocated.
malloc reference
strtol
long int strtol(const char *str, char **endptr, int base);
strtol returns a long int (which in the code above is casted to an int). It splits str into three parts:
Any white-space preceding the numerical content of the string
The part it recognises as numerical, which it will try to convert
The rest of the string
If endptr is not NULL, it will point to the 3rd part, so you know where strtol finished. You could use it like this:
#include <stdio.h>
#include <stdlib.h>
int main()
{
char * endptr = NULL, *str = " 123some more stuff";
int number = strtol(str, &endptr, 10);
printf("number interpreted as %d\n"
"rest of string: %s\n", number, endptr);
return EXIT_SUCCESS;
}
output:
number interpreted as 123
rest of string: some more stuff
strtol reference
This is because the previous newline character left in the input stream by scanf(). Note that fgets() stops if it encounters a newline too.
fgets() reads in at most one less than size characters from stream and
stores them into the buffer pointed to by s. Reading stops after an
EOF or a newline. If a newline is read, it is stored into the
buffer
Don't mix fgets() and scanf(). A trivial solution is to use getchar() right after scanf() in order to consume the newline left in the input stream by scanf().
As per the documentation,
The fgets() function shall read bytes from stream into the array
pointed to by s, until n-1 bytes are read, or a < newline > is read and
transferred to s, or an end-of-file condition is encountered
In case of scanf("%d",&question_no); a newline is left in the buffer and that is read by
fgets(question[track-1],sizeof(question[track-1]),stdin);
and it exits.
In order to flush the buffer you should do,
while((c = getchar()) != '\n' && c != EOF)
/* discard */ ;
to clear the extra characters in the buffer

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