compiling a mpi project with mingw64 - c

i'm trying to get following code running with the "mpiexec -n 4 myprogram" command.
#include <stdio.h>
#include "mpi.h"
#include <omp.h>
int main(int argc, char *argv[]) {
int numprocs, rank, namelen;
char processor_name[MPI_MAX_PROCESSOR_NAME];
int iam = 0, np = 1;
MPI_Init(&argc, &argv);
MPI_Comm_size(MPI_COMM_WORLD, &numprocs);
MPI_Comm_rank(MPI_COMM_WORLD, &rank);
MPI_Get_processor_name(processor_name, &namelen);
#pragma omp parallel default(shared) private(iam, np)
{
np = omp_get_num_threads();
iam = omp_get_thread_num();
printf("Hello from thread %d out of %d from process %d out of %d on %s\n",
iam, np, rank, numprocs, processor_name);
}
MPI_Finalize();
}
i'm using win7 x64, mpich2 x64, eclipse x64 and mingw64 (rubenvb build). it compiles well and also runs in eclipse environment (but there only with one process), but on the command line it immediatly closes without a result or an error. if i compile it to a x86 exe it runs as intended. so whats going wrong? is mpi incompatible with programs compiled by mingw64?

If you build it as a console program, the program will run, finish and then immediately close as there's likely no command sent by the program to hold the console open.
If you run it again, this time by going into the console first and running it from the command line, the console will stay open as it's running as a seperate process, instead of being tied to your program (as is the case when double clicking to run the program).
As for not running in parallel, make sure you have the flag -fopenmp in both the compilation and linking stages.

Related

mpirun was unable to launch the specified application as it could not access or execute an executable with C

I created a clustering program using MPI using 4 nodes. But when I run the MPI program, I can't execute the program even though I've been given full access to the folder I created.
The program I made to count the number of processors running from each node/client
#include <mpi.h>
#include <stdio.h>
int main(int argc, char** argv){
MPI_Init(NULL,NULL);
int world_size;
MPI_Comm_size(MPI_COMM_WORLD, &world_size);
int world_rank;
MPI_Comm_rank(MPI_COMM_WORLD, &world_rank);
char processor_name[MPI_MAX_PROCESSOR_NAME];
int name_len;
MPI_Get_processor_name(processor_name, &name_len);
printf("hello world from processor %s, rank %d out of %d processors\n",processor_name,world_rank,world_size);
MPI_Finalize();
return 0;
}
but when I run the program with the command : mpirun -np 8 --hostfile /mnt/sharedfolder/hostfile /mnt/sharedfolder/hello_world.out
a message like this appears
mpirun was unable to launch the specified application as it could not access
or execute an executable:
Executable: /mnt/sharedfolder/hello_world.out
Node: node-02
while attempting to start process rank 0.
--------------------------------------------------------------------------
8 total processes failed to start
previously I have given full access to the firewall on the google cloud platform on each node.please help me, I'm still learning

OpenMP + MPI Hybrid in C - compilation difficulty

Have to compile something like the following code, (OpenMP + MPI in C)
I have very little experience with compilers, and been having major trouble with this
,need clear steps how to compile such code in windows
,very much appreciated!
#include <stdio.h>
#include "mpi.h"
#include <omp.h>
int main(int argc, char *argv[]) {
int numprocs, rank, namelen;
char processor_name[MPI_MAX_PROCESSOR_NAME];
int iam = 0, np = 1;
MPI_Init(&argc, &argv);
MPI_Comm_size(MPI_COMM_WORLD, &numprocs);
MPI_Comm_rank(MPI_COMM_WORLD, &rank);
MPI_Get_processor_name(processor_name, &namelen);
#pragma omp parallel default(shared) private(iam, np)
{
np = omp_get_num_threads();
iam = omp_get_thread_num();
printf("Hello from thread %d out of %d from process %d out of %d on %s\n",
iam, np, rank, numprocs, processor_name);
}
MPI_Finalize();
}
You can compile with MPI like any other library, and compilers have a specific OpenMP flag. Assuming you use MS-MPI and the Microsoft C/C++ compiler:
Add MPI include and library paths
/I"C:\Program Files (x86)\Microsoft SDKs\MPI\Include" and /libpath:"C:\Program Files (x86)\Microsoft SDKs\MPI\Lib\x64"
Change "C:\Program Files (x86)\Microsoft SDKs\MPI" for wherever you installed MS-MPI
If on a 32 bit machine, repace Lib\x64 with Lib\x86
Add the MPI library to the command line: "msmpi.lib"
Add the OpenMP flag to the command line: /openmp
cl /I"C:\Program Files (x86)\Microsoft SDKs\MPI\Include" /libpath:"C:\Program Files (x86)\Microsoft SDKs\MPI\Lib\x64" /openmp "msmpi.lib" /out:helloworld.exe helloworld.c
See Microsoft's documentation: How to compile and run a simple MS-MPI program and /openmp (Enable OpenMP 2.0 Support)
If you're using GNU tools (mingw or cygwin) then the same would apply: link MPI and add the OpenMP flag.
gcc -I"/path/to/MPI/include" -L"/path/to/MPI/include" -lmpi --openmp -o helloworld.exe helloworld.c
Note that you may need to change -lmpi to -lmpich if your library is a derivative of MPICH.

Open MPI 1.10 not seeing processes on Linux Mint 17

I recently changed from Ubuntu 14 to Linux Mint 17. After re-installing Open MPI 1.10 (which went fine) I ran into a very strange problem:
I compiled my standard mpi_hello_world.c with mpicc and tried to run
it, (mpiexec -n 4 mpi_hello) but got the following output:
Hello world from processor DarkHeresy, rank 0 out of 1 processors
Hello world from processor DarkHeresy, rank 0 out of 1 processors
Hello world from processor DarkHeresy, rank 0 out of 1 processors
Hello world from processor DarkHeresy, rank 0 out of 1 processors
So the mpiexec is only running the process at rank 0!
I also tried to run a more complicated program, but it resulted a following error:
Quitting. Number of MPI tasks (1) must be divisible by 4.
Earlier on Ubuntu, everything was running smoothly using the same parameters.
What could be wrong / how to solve this?
The hello world program was a standard one taken from www.mpitutorial.com:
#include <mpi.h>
#include <stdio.h>
#include <stdlib.h>
int main(int argc, char** argv) {
MPI_Init(NULL, NULL);
int world_size;
MPI_Comm_size(MPI_COMM_WORLD, &world_size);
int world_rank;
MPI_Comm_rank(MPI_COMM_WORLD, &world_rank);
char processor_name[MPI_MAX_PROCESSOR_NAME];
int name_len;
MPI_Get_processor_name(processor_name, &name_len);
printf("Hello world from processor %s, rank %d out of %d processors\n",
processor_name, world_rank, world_size);
MPI_Finalize();
}

OpenMPI Execution Problems on Raspberry Pi

I am trying to build a beowulf cluster with Raspberry Pi. I downloaded the following packages of OpenMPI: openmpi-bin, openmpi-common, libopenmpi1.3, libopenmpi-dbg, libopenmpi-dev. I used static IP on each of the Raspberrys and tested the connection between each of them and it was working. I also enabled the ssh and I used it to login from one Raspberry to all the other Raspberrys.
This is the following code I used:
#include <mpi.h>
int main(int argc, char *argv[])
{
int tid,nthreads;
char *cpu_name;
/* add in MPI startup routines */
/* 1st: launch the MPI processes on each node */
MPI_Init(&argc,&argv);
/* 2nd: request a thread id, sometimes called a "rank" from
the MPI master process, which has rank or tid == 0
*/
MPI_Comm_rank(MPI_COMM_WORLD, &tid);
/* 3rd: this is often useful, get the number of threads
or processes launched by MPI, this should be NCPUs-1
*/
MPI_Comm_size(MPI_COMM_WORLD, &nthreads);
/* on EVERY process, allocate space for the machine name */
cpu_name = (char *)calloc(80,sizeof(char));
/* get the machine name of this particular host ... well
at least the first 80 characters of it ... */
gethostname(cpu_name,80);
printf("hello MPI user: from process = %i on machine=%s, of NCPU=%i processes\n",
tid, cpu_name, nthreads);
MPI_Finalize();
return(0);
}
I tested the code first with only 2 boards and it worked fine no problems no errors and it printed the printf statement in the code.
I created a host file which includes the following:
Pi0
Pi1
Pi2
Pi3
I have 4 Raspberry Pis. I copied the code on each of them and compiled the code also using the following statements:
mpicc -g -0O -c hello-mpi.c -o hello-mpi.o
mpicc -g hello-mpi.o -o hello-mpi
I executed the code with the following statement:
mpirun -np 4 -hostfile hostfile hello-mpi
when I run the program nothing happens it just gives me an new empty line. No errors are given also. Any suggestion what I can I do to make it work

Error while compiling hello world program in mpi in C on openSUSE

PROGRAM :
#include <stdio.h>
#include <mpi.h>
int main (argc, argv)
int argc;
char *argv[];
{
int rank, size;
MPI_Init (&argc, &argv); /* starts MPI */
MPI_Comm_rank (MPI_COMM_WORLD, &rank); /* get current process id */
MPI_Comm_size (MPI_COMM_WORLD, &size); /* get number of processes */
printf( "Hello world from process %d of %d\n", rank, size );
MPI_Finalize();
return 0;
}
ERROR :
/usr/lib/gcc/i586-suse-linux/4.4/../../../../i586-suse-linux/bin/ld: cannot find -lopen-rte
collect2: ld returned 1 exit status
command for compilation :mpicc hello.c -o ./hello.
I am trying to build a cluster of openSUSE nodes.
So I am testing if mpich2 programs run on every node.
libopen-rte.so refers to OpenMPI, not MPICH2. Check default MPI implementation using mpi-selector tool. I personally prefer OpenMPI.
It looks like you have two MPI libraries installed at the same time. While this is possible, it's usually a pain to configure and use if you're not very careful. I'd suggest uninstalling either Open MPI or MPICH. That should take care of your problem.

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