Read-only, rather small database - ways to optimise? - database

I have a following design. There's a pool of identical worker processes (max 64 of them, on average 15) that uses a shared database for reading only. The database is about 25 MB. Currently, it's implemented as a MySQL database, and all the workers connect to it. This works for now, but I'd like to:
eliminate cross-process data transfer - i. e. execute SQL in-process
keep the data completely in memory at all time (I mean, 25 MB!)
not load said 25 MB separately into each process (i. e. keep it in shared memory somehow)
Since it's all reading, concurrent access issues are nonexistent, and locking is not necessary. Data refreshes happen from time to time, but these are unfrequent and I'm willing to shut down the whole shebang for those.
Access is performed via pretty vanilla SQL SELECTs. No subqueries, no joins. LIKE conditions are the fanciest feature ever used. Indices, however, are very much needed.
Question - can anyone think of a database library that would provide the goals outlined above?

You can use SQLite with its in-memory database.

I would look at treating like a cache. MEMCACHED is easy and very fast as all in memory. Fan of MongoDB or similar will also be faster although disk based.

Related

Write once read many in memory key value store

I have a particular use case for multiple in memory key value maps that need very fast lookup time. They are set just set once a day so can be considered immutable for all practical purposes. Redis is not an option since it gets CPU throttled in case of multiple threads accessing it. Multi instance redis takes up too much memory because of data replication. The important thing to consider here is that the read rate is very high in bursts. Around 10 million requests in bursts from around 40-50 workers simultaneously.
I was thinking of creating a simple client server architecture with multiple readers connecting to a server to read from shared memory maps. However I wonder if such an architecture already exists and has been tested profusely for this use case in which case I should not be reinventing the wheel.
So to sum up what is my best alternative? TIA.
Might not be suitable for you but you could try RBLDNSD and store your values in DNS. It's high performance and results will be cached, and it's easy to read the values from pretty much any programming environment. To write values to it you'll need to write directly to its zone files, but the format is simple and easy to write.
You don't mention the size of your maps, but given that performance is so critical, it sounds like you may want to consider keeping copies of your 'multiple in memory key value maps' with each worker.
You could then implement a simple mechanism to notify each worker that it's time to refresh their maps (e.g. Redis PUBLISH, or any other pubsub type framework).
At the risk of running afoul of the stackoverlow self-promotion police :-) eXtremeDB might be a consideration. It's not schema-less, but your schema can simply define a key-value pair. It supports MVCC (optimistic, non-blocking) concurrency so even the relatively infrequent writes won't get in the way of readers, and you'll be able to utilize all the CPU cores.

How expensive is access to database? How often do we access to it?

I'm about to write an application for Android, and it will use Mysql.
I know that access to DB is really expensive in terms of time, and would like to know how often do applications like instant messaging, online gaming access to databases?
For example in a game, we would like to save the positions of a player in the world, when he's moving all the time.
Is the database access actually not expensive, and there is a way to be connected to it all the time and just do request that are actually not expensive?
Or is IT really expensive in anyway, and there are techniques to access to it for example every X interval of time, and saving it locally in the meantime?
I Know that my question is really general, and it depends always on what we need and want.
My question came out because i made a really simple login application that connects and does 1 request to database, and it takes 1 second (a lot!!) to get the result, so how online applications can be so fast?
Thank you
Before answering this I would recommend simulating the process as much as possible, benchmarking and you can work towards the best solution for your use case.
e.g. If I have an application submitting data to a database simulate the submission so I can easily run multiple submissions at the same time and see what the bottle neck is...and see how it compares when I using caching, replication, indexes, etc.
Also reading company blogs can be helpful as they often share success stories that support the usage of a particular approach
How expensive is access to database?
Accessing a database can be a pretty quick operation
SELECT 1; // 0.005 Secs :D
However there are situations that can lead to poor performance (slow reads, writes and updates) but there are some relatively simple ways to combat this
Indexes
The best way to improve the performance of SELECT operations is to
create indexes on one or more of the columns that are tested in the
query. The index entries act like pointers to the table rows, allowing
the query to quickly determine which rows match a condition in the
WHERE clause, and retrieve the other column values for those rows.
Replication
spreading the load among multiple slaves to improve performance. In
this environment, all writes and updates must take place on the master
server. Reads, however, may take place on one or more slaves. This
model can improve the performance of writes (since the master is
dedicated to updates), while dramatically increasing read speed across
an increasing number of slaves.
How often do we access to it?
If you are solely using a database you will access it every time you n position and every time you need to find out their position.
This is where you would explore options to prevent accessing the database.
Memory caches such as redis or memcache
Replication - Only read from slaves
It depends on your design and requirement.
1) Most of the applications manage Connection Pools to minimize the initialization time.
2) Most of the ORM frameworks have external Cache to improve the reading performance. So if you do heavy data reading in your application then don't worry about storing it in locally. The Cache will be effective in this case.
3) When you store locally either in File (or) some format, then it will also add extra performance delay.
4) If you keep the data in primary memory, then obviously Game performance would be better. That's why Gamers prefer high end graphics card, and huge RAM.
For most databases there is the option of batch insertions. Obviously even a small overhead will accumulate if you have to many connections over time. And performing single insertions will have a greater overhead than on batch. The only issue is how often?.... And you should test how often you wan't to insert and how much information you should store locally before doing a batch insertion.

Advice on using a web server as a cache

I'd like advice on the following design. Is it reasonable? Is it stupid/insane?
Requirements:
We have some distributed calculations that work on chunks of data that are sometimes up to 50Mb in size.
Because the calculations take a long time, we like to parallelize the calculations on a small grid (around 20 nodes)
We "produce" around 10000 of these "chunks" of binary data each day - and want to keep them around for up to a year... Most of the items aren't 50Mb in size though, so the total daily space requirement is more around 5Gb... But we'd like to keep stuff around for as long as possible, (a year or more)... But hey, you can get 2TB hard disks nowadays.
Although we'd like to keep the data around, this is essentially a "cache". It's not the end of the world if we lose data - it just has to get recalculated, which just takes some time (an hour or two).
We need to be able to efficiently get a list of all "chunks" that were produced on a particular day.
We often need to, from a support point of view, delete all chunks created on a particular day or remove all chunks created within the last hour.
We're a Windows shop - we can't easily switch to Linux/some other OS.
We use SQLServer for existing database requirements.
However, it's a large and reasonably bureaucratic company that has some policies that limit our options: for example, conventional database space using SQLServer is charged internally at extremely expensive prices. Allocating 2 terabytes of SQL Server space is prohibitively expensive. This is mainly because our SQLServer instances are backed up, archived for 7 years, etc. etc. But we don't need this "gold-plated" functionality because we can just recreate the stuff if it goes missing. At heart, it's just a cache, that can be recreated on demand.
Running our own SQLServer instance on a machine that we maintain is not allowed (all SQLServer instances must be managed by a separate group).
We do have fairly small transactional requirement: if a process that was producing a chunk dies halfway through, we'd like to be able to detect such "failed" transactions.
I'm thinking of the following solution, mainly because it seems like it would be very simple to implement:
We run a web server on top of a windows filesystem (NTFS)
Clients "save" and "load" files by using HTTP requests, and when processes need to send blobs to each other, they just pass the URLs.
Filenames are allocated using GUIDS - but have a directory for each date. So all of the files created on 12th November 2010 would go in a directory called "20101112" or something like that. This way, by getting a "directory" for a date we can find all of the files produced for that date using normal file copy operations.
Indexing is done by a traditional SQL Server table, with a "URL" column instead of a "varbinary(max)" column.
To preserve the transactional requirement, a process that is creating a blob only inserts the corresponding "index" row into the SQL Server table after it has successfully finished uploading the file to the web server. So if it fails or crashes halfway, such a file "doesn't exist" yet because the corresponding row used to find it does not exist in the SQL server table(s).
I like the fact that the large chunks of data can be produced and consumed over a TCP socket.
In summary, we implement "blobs" on top of SQL Server much the same way that they are implemented internally - but in a way that does not use very much actual space on an actual SQL server instance.
So my questions are:
Does this sound reasonable. Is it insane?
How well do you think that would work on top of a typical windows NT filesystem? - (5000 files per "dated" directory, several hundred directories, one for each day). There would eventually be many hundreds of thousands of files, (but not too many directly underneath any one particular directory). Would we start to have to worry about hard disk fragmentation etc?
What about if 20 processes are all, via the one web server, trying to write 20 different "chunks" at the same time - would that start thrashing the disk?
What web server would be the best to use? It needs to be rock solid, runs on windows, able to handle lots of concurrent users.
As you might have guessed, outside of the corporate limitations, I would probably set up a SQLServer instance and just have a table with a "varbinary(max)" column... But given that is not an option, how well do you think this would work?
This is all somewhat out of my usual scope so I freely admit I'm a bit of a Noob in this department. Maybe this is an appalling design... but it seems like it would be very simple to understand how it works, and to maintain and support it.
Your reasons behind the design are insane, but they're not yours :)
NTFS can handle what you're trying to do. This shouldn't be much of a problem. Yes, you might eventually have fragmentation problems if you run low on disk space, but make sure that you have copious amounts of space and you shouldn't have a problem. If you're a Windows shop, just use IIS.
I really don't think you will have much of a problem with this architecture. Just keep it simple like you're doing and things should be fine.

What's more costly on every page view - Database Writes or File Writes?

What is the most efficient solution when you need to record some data on every page view in your application - should you write to a file or write to the database?
Or maybe neither - perhaps you should cache the data in memory or a file and only write it to the database (or file system if you use a memory cache) occasionally?
If it's purely recording a small amount of data with no subsequent lookups, straight file I/O is almost guaranteed to be more efficient. You're losing all the advantages of a DBMS though -- indexing, transactional integrity (really, ACID in general), concurrent access, etc..
It almost sounds like you're talking about what amounts to simple logging. If that's the case, and you don't need to do frequent complex queries on the resulting data, you're probably better off with straight file I/O if performance is a serious issue. Be careful of concurrent-write issues, though.
If the properties of an RDBMS are desirable, you might think about using SQLite, which for simplistic loads will get you better performance than most RDBMSs with less overhead, at the cost of some of the benefits (highly concurrent access and availability over the network to other machines are a couple of the "biggies"). It still wouldn't be as fast as straight file I/O in the general case, though.
Your later mention of it being for page view tracking causes me to ask: Are you incrementing a counter, rather than logging data about the page view? If so, I'd strongly suggest going with something like SQLite (doing something like UPDATE tbl SET counter = counter+1). You really don't want to get into the timing issues involved in doing this by hand -- if you don't do it right, you'll start losing counts on simultaneous access (A reads "100", B reads "100", A writes "101", B writes "101"; B should have written 102, but has no way of knowing that).
Conceptually, writing to the database is always slower than writing to a file.
The database has to write to a file too, with the extra overhead of communication to get the data to the database, so it can write it to a file. Therefore, it must be slower.
That said, databases do disk I/O very well, probably better than you will. Don't be surprised if you find out that a simple file logger is slower than writing it to a database. The database has a lot of I/O optimizations, and has some tricks available that you may not (depending on your web lanaguage and environment).
Don't be surprised if the answer changes over time. When your site is small, logging to a database is very fast. As your site grows, the logging table can become a major pain: It uses a lot of disk space, makes the backups take forever, and consumes all the disk I/O when you try to query it. This is why you should benchmark both methods yourself. Then you can re-test in the future, when conditions change.
Hitting the database is most likely going to be more expensive than writing to a file.
If your pageviews per second are high, and if the data doesn't need to be available in the database right away, then writing to a file and periodically loading the data into the DB will be a more optimal solution.
However it all depends on the nature of the data you're recording per page view and how critical it is to whatever business function it serves.
That highly depends on your needs for data safety. If you can afford to lose some data in case of a crash then keeping the data in memory and writing it periodically to a persistent store is certainly the most efficient way to go.
Edit: You mentioned pageviews. In that case I would keep the counters in memory and periodically update a database table (like every minute or so).
That depends.
Ands it really does: it depends on the DBMS and/or the OS+filesystem you use. In other words: your mileage varies.
If you just append data somewhere modern DBMS/OS+filesystems should handle this equally well and fast. Problems arise when you want to change data.
Caching - depends too on what kind of caching granularity you can afford (need to have every stepped logged crash-safe versus potential saving).
Use a hybrid solution like redis its designed for this sort of stuff

performance of web app with high number of inserts

What is the best IO strategy for a high traffic web app that logs user behaviour on a website and where ALL of the traffic will result in an IO write? Would it be to write to a file and overnight do batch inserts to the database? Or to simply do an INSERT (or INSERT DELAYED) per request? I understand that to consider this problem properly much more detail about the architecture would be needed, but a nudge in the right direction would be much appreciated.
By writing to the DB, you allow the RDBMS to decide when disk IO should happen - if you have enough RAM, for instance, it may be effectively caching all those inserts in memory, writing them to disk when there's a lighter load, or on some other scheduling mechanism.
Writing directly to the filesystem is going to be bandwidth-limited more-so than writing to a DB which then writes, expressly because the DB can - theoretically - write in more efficient sizes, contiguously, and at "convenient" times.
I've done this on a recent app. Inserts are generally pretty cheap (esp if you put them into an unindexed hopper table). I think that you have a couple of options.
As above, write data to a hopper table, if what ever application framework supports batched inserts, then use these, it will speed it up. Then every x requests, do a merge (via an SP call) into a master table, where you can normalize off data that has low entropy. For example if you are storing if the HTTP type of the request (get/post/etc), this can only ever be a couple of types, and better to store as an Int, and get improved I/O + query performance. Your master tables can also be indexed as you would normally do.
If this isn't good enough, then you can stream the requests to files on the local file system, and then have an out of band (i.e seperate process from the webserver) suck these files up and BCP them into the database. This will be at the expense of more moving parts, and potentially, a greater delay between receiving requests and them finding their way into the database
Hope this helps, Ace
When working with an RDBMS the most important thing is optimizing write operations to disk. Something somewhere has got to flush() to persistant storage (disk drives) to complete each transaction which is VERY expensive and time consuming. Minimizing the number of transactions and maximizing the number of sequential pages written is key to performance.
If you are doing inserts sending them in bulk within a single transaction will lead to more effecient write behavior on disk reducing the number of flush operations.
My recommendation is to queue the messages and periodically .. say every 15 seconds or so start a transaction ... send all queued inserts ... commit the transaction.
If your database supports sending multiple log entries in a single request/command doing so can have a noticable effect on performance when there is some network latency between the application and RDBMS by reducing the number of round trips.
Some systems support bulk operations (BCP) providing a very effecient method for bulk loading data which can be faster than the use of "insert" queries.
Sparing use of indexes and selection of sequential primary keys help.
Making sure multiple instances either coordinate write operations or write to separate tables can improve throughput in some instances by reducing concurrency management overhead in the database.
Write to a file and then load later. It's safer to be coupled to a filesystem than to a database. And the database is more likely to fail than the your filesystem.
The only problem with using the filesystem to back writes is how you extend the log.
A poorly implemented logger will have to open the entire file to append a line to the end of it. I witnessed one such example case where the person logged to a file in reverse order, being the most recent entries came out first, which required loading the entire file into memory, writing 1 line out to the new file, and then writing the original file contents after it.
This log eventually exceeded phps memory limit, and as such, bottlenecked the entire project.
If you do it properly however, the filesystem reads/writes will go directly into the system cache, and will only be flushed to disk every 10 or more seconds, ( depending on FS/OS settings ) which has a negligible performance hit compared to writing to arbitrary memory addresses.
Oh yes, and whatever system you use, you'll need to think about concurrent log appending. If you use a database, a high insert load can cause you to have deadlock conditions, and on files, you need to make sure that you're not going to have 2 concurrent writes cancel each other out.
The insertions will generally impact the (read/update) performance of the table. Perhaps you can do the writes to another table (or database) and have batch job that processes this data. The advantages of the database approach is that you can query/report on the data and all the data is logically in a relational database and may be easier to work with. Depending on how the data is logged to text file, you could open up more possibilities for corruption.
My instinct would be to only use the database, avoiding direct filesystem IO at all costs. If you need to produce some filesystem artifact, then I'd use a nightly cron job (or something like it) to read DB records and write to the filesystem.
ALSO: Only use "INSERT DELAYED" in cases where you don't mind losing a few records in the event of a server crash or restart, because some records almost certainly WILL be lost.
There's an easier way to answer this. Profile the performance of the two solutions.
Create one page that performs the DB insert, another that writes to a file, and another that does neither. Otherwise, the pages should be identical. Hit each page with a load tester (JMeter for example) and see what the performance impact is.
If you don't like the performance numbers, you can easily tweak each page to try and optimize performance a bit or try new solutions... everything from using MSMQ backed by MSSQL to delayed inserts to shared logs to individual files with a DB background worker.
That will give you a solid basis to make this decision rather than depending on speculation from others. It may turn out that none of the proposed solutions are viable or that all of them are viable...
Hello from left field, but no one asked (and you didn't specify) how important is it that you never, ever lose data?
If speed is the problem, leave it all in memory, and dump to the database in batches.
Do you log more than what would be available in the webserver logs? It can be quite a lot, see Apache 2.0 log information for example.
If not, then you can use the good old technique of buffering then batch writing. You can buffer at different places: in memory on your server, then batch insert them in db or batch write them in a file every X requests, and/or every X seconds.
If you use MySQL there are several different options/techniques to load efficiently a lot of data: LOAD DATA INFILE, INSERT DELAYED and so on.
Lots of details on insertion speeds.
Some other tips include:
splitting data into different tables per period of time (ie: per day or per week)
using multiple db connections
using multiple db servers
have good hardware (SSD/multicore)
Depending on the scale and resources available, it is possible to go different ways. So if you give more details, i can give more specific advices.
If you do not need to wait for a response such as a generated ID, you may want to adopt an asynchronous strategy using either a message queue or a thread manager.

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