How does Voldemort compare to Cassandra? - database

How does Voldemort compare to Cassandra?
I'm not talking about size of community and only want to hear from people who have actually used both.
Especially I'm interested in:
How they dynamically scale when adding and removing nodes
Query performance
How they scale when adding nodes (linear)?
Write speed

Voldemort's support for adding nodes was just added recently (this month). So I would expect Cassandra's to be more robust given the longer time to cook and a larger community testing.
Both are fast (> 10k ops/s per machine). Because of their storage designs, I would expect Cassandra to be faster at writes, and Voldemort to be faster at reads. I would also expect Cassandra's performance to degrade less as the amount of data per node increases. And of course if you need more than just a key/value data model Cassandra's ColumnFamily model wins.
I don't know of any head-to-head benchmarks since the one done for NoSQL SF last June, which found Cassandra to be somewhat faster at whatever workload mix he was using. (The "vpork" talk from http://blog.oskarsson.nu/2009/06/nosql-debrief.html) 8 months is an eternity with projects under this much development, though.

Some additional comments:
Regarding write speed, Cassandra should be faster -- it is designed to be faster to write than read (you can avoid immediate disk hit for writes due to specialized way storage is done)
But main difference I think is actually not performance but feature set: Voldemort is strictly a key/value store (currently anyway), whereas Cassandra can offer range queries (with order-preserving partitioner), and bit more structure around data (column families etc). Former is an important consideration for design; latter IMO less so, you can always structure BLOB data on client side.

Related

Which NoSQL Database for Mostly Writing

I'm working on a system that will generate and store large amounts of data to disk. A previously developed system at the company used ordinary files to store its data but for several reasons it became very hard to manage.
I believe NoSQL databases are good solutions for us. What we are going to store is generally documents (usually around 100K but occasionally can be much larger or smaller) annotated with some metadata. Query performance is not top priority. The priority is writing in a way that I/O becomes as small a hassle as possible. The rate of data generation is about 1Gbps, but we might be moving on 10Gbps (or even more) in the future.
My other requirement is the availability of a (preferably well documented) C API. I'm currently testing MongoDB. Is this a good choice? If not, what other database system can I use?
The rate of data generation is about 1Gbps,... I'm currently testing MongoDB. Is this a good choice?
OK, so just to clarify, your data rate is ~1 gigaBYTE per 10 seconds. So you are filling a 1TB hard drive every 20 minutes or so?
MongoDB has pretty solid write rates, but it is ideally used in situations with a reasonably low RAM to Data ratio. You want to keep at least primary indexes in memory along with some data.
In my experience, you want about 1GB of RAM for every 5-10GB of Data. Beyond that number, read performance drops off dramatically. Once you get to 1GB of RAM for 100GB of data, even adding new data can be slow as the index stops fitting in RAM.
The big key here is:
What queries are you planning to run and how does MongoDB make running these queries easier?
Your data is very quickly going to occupy enough space that basically every query will just be going to disk. Unless you have a very specific indexing and sharding strategy, you end up just doing disk scans.
Additionally, MongoDB does not support compression. So you will be using lots of disk space.
If not, what other database system can I use?
Have you considered compressed flat files? Or possibly a big data Map/Reduce system like Hadoop (I know Hadoop is written in Java)
If C is key requirement, maybe you want to look at Tokyo/Kyoto Cabinet?
EDIT: more details
MongoDB does not support full-text search. You will have to look to other tools (Sphinx/Solr) for such things.
Larges indices defeat the purpose of using an index.
According to your numbers, you are writing 10M documents / 20 mins or about 30M / hour. Each document needs about 16+ bytes for an index entry. 12 bytes for ObjectID + 4 bytes for pointer into the 2GB file + 1 byte for pointer to file + some amount of padding.
Let's say that every index entry needs about 20 bytes, then your index is growing at 600MB / hour or 14.4GB / day. And that's just the default _id index.
After 4 days, your main index will no longer fit into RAM and your performance will start to drop off dramatically. (this is well-documented under MongoDB)
So it's going to be really important to figure out which queries you want to run.
Have a look at Cassandra. It executes writes are much faster than reads. Probably, that's what you're looking for.

Databases: More questions about (B-Tree) indexes

I've been studying indexes and there are some questions that pother me and which I think important.
If you can help or refer to sources, please feel free to do it.
Q1: B-tree indexes can favor a fast access to specific rows on a table. Considering an OLTP system, with many accesses, both Read and Write, simultaneously, do you think it can be a disadvantage having many B-tree indexes on this system? Why?
Q2: Why are B-Tree indexes not fully occupied (typically only 75% occupied, if I'm not mistaken)?
Q1: I've no administration experience with large indexing systems in practice, but the typical multiprocessing environment drawbacks apply to having multiple B-tree indexes on a system -- cost of context switching, cache invalidation and flushing, poor IO scheduling, and the list goes up. On the other hand, IO is something that inherently ought to be non-blocking for maximal use of resources, and it's hard to do that without some sort of concurrency, even if done in a cooperative manner. (For example, some people recommend event-based systems.) Also, you're going to need multiple index structures for many practical applications, especially if you're looking at OLTP. The biggest thing here is good IO scheduling, access patterns, and data caching depending on said access patterns.
Q2: Because splitting and re-balancing nodes is expensive. The naive methodology for speed is "only split with they're full." Given this, there's two extremes -- a node was just split and is half full, or a node is full so it will be next time. The 'average' between the cases (50% and 100%) is 75%. Yes, it's somewhat bad logic from a mathematics perspective, but it exposes the underlying reason as to why the 75% figure appears.

How does database query time scale with database size?

I was recently on the OEIS (Online Encyclopedia of Integer Sequences) recently, trying to look up a particular sequence I had on had.
Now, this database is fairly large. The website states that if the 2006 (! 5 years old) edition were printed, it would occupy 750 volumes of text.
I'm sure this is the same sort of issue Google has to handle as well. But, they also have a distributed system where they take advantage of load balancing.
Neglecting load balancing however, how much time does it take to do a query compared to database size?
Or in other words, what is the time complexity of a query with respect to DB size?
Edit: To make things more specific, assume the input query is simply looking up a string of numbers such as:
1, 4, 9, 16, 25, 36, 49
It strongly depends on the query, structure of the database, contention, and so on. But in general most databases will find a way to use an index, and that index will either be some kind of tree structure (see http://en.wikipedia.org/wiki/B-tree for one option) in which case access time is proportional to log(n), or else a hash in which case access time is proportional to O(1) on average (see http://en.wikipedia.org/wiki/Hash_function#Hash_tables for an explanation of how they work).
So the answer is typically O(1) or O(log(n)) depending on which type of data structure is used.
This may cause you to wonder why we don't always use hash functions. There are multiple reasons. Hash functions make it hard to retrieve ranges of values. If the hash function fails to distribute data well, it is possible for access time to become O(n). Hashes need resizing occasionally, which is potentially very expensive. And log(n) grows slowly enough that you can treat it as being reasonably close to constant across all practical data sets. (From 1000 to 1 petabyte it varies by a factor of 5.) And frequently the actively requested data shows some sort of locality, which trees do a better job of keeping in RAM. As a result trees are somewhat more commonly seen in practice. (Though hashes are by no means rare.)
That depends on a number of factors including the database engine implementation, indexing strategy, specifics of the query, available hardware, database configuration, etc.
There is no way to answer such a general question.
A properly designed and implemented database with terabytes of data may actually outperform a badly designed little database (particulaly one with no indexing and one that uses badly performing non-sargable queries and things such as correlated subqueries). This is why anyone expecting to have large amounts of data needs to hire an expert on databse design for large databases to do the intial design not later when the database is large. You may also need to invest in the type of equipment you need to handle the size as well.

Recommended Document Structure for CouchDB

We are currently considering a change from Postgres to CouchDB for a usage monitoring application. Some numbers:
Approximately 2000 connections, polled every 5 minutes, for approximately 600,000 new rows per day. In Postgres, we store this data, partitioned by day:
t_usage {service_id, timestamp, data_in, data_out}
t_usage_20100101 inherits t_usage.
t_usage_20100102 inherits t_usage. etc.
We write data with an optimistic stored proc that presumes the partition exists and creates it if necessary. We can insert very quickly.
For reading of the data, our use cases, in order of importance and current performance are:
* Single Service, Single Day Usage : Good Performance
* Multiple Services, Month Usage : Poor Performance
* Single Service, Month Usage : Poor Performance
* Multiple Services, Multiple Months : Very Poor Performance
* Multiple Services, Single Day : Good Performance
This makes sense because the partitions are optimised for days, which is by far our most important use case. However, we are looking at methods of improving the secondary requirements.
We often need to parameterise the query by hours as well, for example, only giving results between 8am and 6pm, so summary tables are of limited use. (These parameters change with enough frequency that creating multiple summary tables of data is prohibitive).
With that background, the first question is: Is CouchDB appropriate for this data? If it is, given the above use cases, how would you best model the data in CouchDB documents? Some options I've put together so far, which we are in the process of benchmarking are (_id, _rev excluded):
One Document Per Connection Per Day
{
service_id:555
day:20100101
usage: {1265248762: {in:584,out:11342}, 1265249062: {in:94,out:1242}}
}
Approximately 60,000 new documents a month. Most new data would be updates to existing documents, rather than new documents.
(Here, the objects in usage are keyed on the timestamp of the poll, and the values the bytes in and byes out).
One Document Per Connection Per Month
{
service_id:555
month:201001
usage: {1265248762: {in:584,out:11342}, 1265249062: {in:94,out:1242}}
}
Approximately 2,000 new documents a month. Moderate updates to existing documents required.
One Document Per Row of Data Collected
{
service_id:555
timestamp:1265248762
in:584
out:11342
}
{
service_id:555
timestamp:1265249062
in:94
out:1242
}
Approximately 15,000,000 new documents a month. All data would be an insert to a new document. Faster inserts, but I have questions about how efficient it's going to be after a year or 2 years with hundreds of millions of documents. The file IO would seem prohibitive (though I'm the first to admit I don't fully understand the mechanics of it).
I'm trying to approach this in a document-oriented way, though breaking the RDMS habit is difficult :) The fact you can only minimally parameterise views as well has me a bit concerned. That said, which of the above would be the most appropriate? Are there other formats that I haven't considered which will perform better?
Thanks in advance,
Jamie.
I don't think it's a horrible idea.
Let's consider your Connection/Month scenario.
Given that an entry is ~40 (that's generous) characters long, and you get ~8,200 entries per month, your final document size will be ~350K long at the end of the month.
That means, going full bore, you're be reading and writing 2000 350K documents every 5 minutes.
I/O wise, this is less than 6 MB/s, considering read and write, averaged for the 5m window of time. That's well within even low end hardware today.
However, there is another issue. When you store that document, Couch is going to evaluate its contents in order to build its view, so Couch will be parsing 350K documents. My fear is that (at last check, but it's been some time) I don't believe Couch scaled well across CPU cores, so this could easily pin the single CPU core that Couch will be using. I would like to hope that Couch can read, parse, and process 2 MB/s, but I frankly don't know. With all it's benefits, erlang isn't the best haul ass in a straight line computer language.
The final concern is keeping up with the database. This will be writing 700 MB every 5 minutes at the end of the month. With Couchs architecture (append only), you will be writing 700MB of data every 5 min, which is 8.1GB per hour, and 201GB after 24 hrs.
After DB compression, it crushes down to 700MB (for a single month), but during that process, that file will be getting big, and quite quickly.
On the retrieve side, these large documents don't scare me. Loading up a 350K JSON document, yes it's big, but it's not that big, not on modern hardware. There are avatars on bulletin boards bigger than that. So, anything you want to do regarding the activity of a connection over a month will be pretty fast I think. Across connections, obviously the more you grab, the more expensive it will get (700MB for all 2000 connections). 700MB is a real number that has real impact. Plus your process will need to be aggressive in throwing out the data you don't care about so it can throw away the chaff (unless you want to load up 700MB of heap in your report process).
Given these numbers, Connection/Day may be a better bet, as you can control the granularity a bit better. However, frankly, I would go for the coarsest document you can, because I think that gives you the best value from the database, solely because today all the head seeks and platter rotations are what kill a lot of I/O performance, many disk stream data very well. Larger documents (assuming well located data, since Couch is constantly compacted, this shouldn't be a problem) stream more than seek. Seeking in memory is "free" compared to a disk.
By all means run your own tests on our hardware, but take all these considerations to heart.
EDIT:
After more experiments...
Couple of interesting observations.
During import of large documents CPU is equally important to I/O speed. This is because of the amount of marshalling and CPU consumed by converting the JSON in to the internal model for use by the views. By using the large (350k) documents, my CPUs were pretty much maxed out (350%). In contrast, with the smaller documents, they were humming along at 200%, even though, overall, it was the same information, just chunked up differently.
For I/O, during the 350K docs, I was charting 11MB/sec, but with the smaller docs, it was only 8MB/sec.
Compaction appeared to be almost I/O bound. It's hard for me to get good numbers on my I/O potential. A copy of a cached file pushes 40+MB/sec. Compaction ran at about 8MB/sec. But that's consistent with the raw load (assuming couch is moving stuff message by message). The CPU is lower, as it's doing less processing (it's not interpreting the JSON payloads, or rebuilding the views), plus it was a single CPU doing the work.
Finally, for reading, I tried to dump out the entire database. A single CPU was pegged for this, and my I/O pretty low. I made it a point to ensure that the CouchDB file wasn't actually cached, my machine has a lot of memory, so a lot of stuff is cached. The raw dump through the _all_docs was only about 1 MB/sec. That's almost all seek and rotational delay than anything else. When I did that with the large documents, the I/O was hitting 3 MB/sec, that just shows the streaming affect I mentioned a benefit for larger documents.
And it should be noted that there are techniques on the Couch website about improving performance that I was not following. Notably I was using random IDs. Finally, this wasn't done as a gauge of what Couch's performance is, rather where the load appears to end up. The large vs small document differences I thought were interesting.
Finally, ultimate performance isn't as important as simply performing well enough for you application with your hardware. As you mentioned, you're doing you're own testing, and that's all that really matters.

Advice on building a fast, distributed database

I'm currently working on a problem that involves querying a tremendous amount of data (billions of rows) and, being somewhat inexperienced with this type of thing, would love some clever advice.
The data/problem looks like this:
Each table has 2-5 key columns and 1 value column.
Every row has a unique combination of keys.
I need to be able to query by any subset of keys (i.e. key1='blah' and key4='bloo').
It would be nice to able to quickly insert new rows (updating the value if the row already exists) but I'd be satisfied if I could do this slowly.
Currently I have this implemented in MySQL running on a single machine with separate indexes defined on each key, one index across all keys (unique) and one index combining the first and last keys (which is currently the most common query I'm making, but that could easily change). Unfortunately, this is quite slow (and the indexes end up taking ~10x the disk space, which is not a huge problem).
I happen to have a bevy of fast computers at my disposal (~40), which makes the incredible slowness of this single-machine database all the more annoying. I want to take advantage of all this power to make this database fast. I've considered building a distributed hash table, but that would make it hard to query for only a subset of the keys. It seems that something like BigTable / HBase would be a decent solution but I'm not yet convinced that a simpler solution doesn't exist.
Thanks very much, any help would be greatly appreciated!
I'd suggest you listen to this podcast for some excellent information on distributed databases.
episode-109-ebays-architecture-principles-with-randy-shoup
To point out the obvious: you're probably disk bound.
At some point if you're doing randomish queries and your working set is sufficiently larger than RAM then you'll be limited by the small number of random IOPS a disk can do. You aren't going to be able to do better than a few tens of sub-queries per second per attached disk.
If you're up against that bottleneck, you might gain more by switching to an SSD, a larger RAID, or lots-of-RAM than you would by distributing the database among many computers (which would mostly just get you more of the last two resources)

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